Gene ECH74115_4934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_4934 
SymbolglyS 
ID6970455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp4571603 
End bp4573672 
Gene Length2070 bp 
Protein Length689 aa 
Translation table11 
GC content55% 
IMG OID643388617 
Productglycyl-tRNA synthetase subunit beta 
Protein accessionYP_002273044 
Protein GI209399717 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0751] Glycyl-tRNA synthetase, beta subunit 
TIGRFAM ID[TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value0.711684 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAGA AAACTTTTCT GGTGGAAATC GGCACTGAAG AGCTGCCACC AAAAGCACTG 
CGCAGCCTGG CAGAGTCCTT TGCTGCGAAC TTTACTGCGG AGCTGGATAA CGCAGGCCTC
GCACACGGCA CCGTTCAATG GTTTGCTGCT CCGCGTCGTC TGGCGCTGAA AGTAGCTAAC
CTGGCGGAAG CGCAACCGGA TCGTGAAATC GAAAAACGCG GCCCGGCGAT TGCCCAGGCG
TTCGACGCTG AAGGCAAACC GAGCAAAGCG GCAGAAGGTT GGGCGCGTGG TTGCGGTATT
ACCGTTGACC AGGCTGAGCG TCTGACTACC GATAAAGGCG AATGGCTGCT GTATCGCGCC
CATGTGAAGG GCGAAAGCAC TGAAGCACTG CTGCCGAATA TGGTTGCGAC TTCGCTGGCG
AAACTGCCGA TTCCGAAACT GATGCGCTGG GGTGCAAGCG ACGTGCACTT CGTGCGTCCG
GTGCACACCG TGACCCTGCT GCTGGGCGAC AAAGTCATTC CTGCAACCAT TCTGGGCATT
CAGTCCGATC GCGTGATTCG CGGCCACCGC TTTATGGGCG AGCCGGAATT CACCATCGAT
AACGCCGATC AGTATCCGGA AATTCTGCGT GAGCGTGGGA AAGTCATCGC CGATTACGAA
GAACGTAAGG CGAAGATTAA AGCCGATGCC GAAGAAGCAG CGCGTAAGAT TGGCGGTAAC
GCTGACTTAA GCGAAAGCCT GCTGGAAGAA GTGGCTTCGC TGGTGGAGTG GCCGGTCGTT
CTAACCGCGA AATTTGAAGA GAAATTCCTC GCGGTGCCGT CTGAAGCACT GGTTTACACC
ATGAAAGGTG ACCAGAAGTA CTTCCCGGTG TATGCGAACG ACGGCAAACT GCTGCCGAAC
TTTATCTTCG TTGCCAACAT CGAATCGAAA GATCCGCAGC AAATTATCTC TGGTAACGAG
AAAGTCGTTC GTCCACGTCT GGCTGATGCC GAGTTCTTCT TCAACACCGA CCGTAAAAAA
CGTCTGGAAG ATAACCTGCC GCGCCTGCAA ACCGTGCTGT TCCAGCAACA GCTGGGTACG
CTGCGTGACA AGACTGACCG CATCCAGGCG CTGGCTGGCT GGATCGCCGA ACAGATTGGC
GCTGACGTTA ACCACGCAAC CCGTGCGGGC CTGCTGTCTA AGTGTGACCT GATGACCAAC
ATGGTCTTCG AGTTCACCGA CACCCAAGGC GTTATGGGGA TGCACTACGC GCGTCACGAT
GGCGAAGCGG AAGACGTAGC CGTCGCGCTG AATGAGCAGT ATCAGCCGCG CTTTGCCGGT
GATGACCTGC CGTCCAACCC GGTAGCTTGT GCGCTGGCGA TTGCTGATAA GATGGATACT
CTGGCGGGTA TCTTCGGTAT CGGTCAGCAT CCGAAAGGCG ACAAAGACCC GTTTGCGCTG
CGTCGTGCCG CACTTGGCGT GCTGCGAATT ATCGTTGAGA AGAACCTCAA CCTTGATCTG
CAAACGCTGA CCGAAGAAGC GGTGCGTCTG TATGGCGATA AGCTGACTAA TGCCAACGTA
GTTGATGATG TTATCGACTT TATGCTCGGT CGCTTCCGCG CCTGGTATCA GGACGAAGGT
TATACCGTTG ACACCATCCA GGCGGTACTG GCGCGTCGTC CGACTCGTCC GGCTGATTTC
GATGCCCGCA TGAAAGCGGT ATCGCACTTC CGTACCCTGG AAGCAGCTGC AGCACTGGCG
GCGGCGAACA AACGTGTATC TAACATCCTG GCGAAATCTG ACGAAGTGCT GAGCGATCGC
GTGAATGCCT CTACTCTGAA AGAGCCGGAA GAAATTAAAC TGGCGATGCA GGTTGTGGTG
CTACGTGACA AGCTGGAGCC GTACTTTGCG GAAGGTCGTT ACCAGGATGC GCTGGTCGAA
CTGGCAGAGC TGCGTGAACC AGTCGATGCC TTCTTCGATA AAGTGATGGT CATGGTTGAT
GACAAAGAAT TGCGTATCAA CCGTCTGACC ATGCTGGAGA AACTGCGCGA ACTGTTCCTG
CGCGTTGCGG ATATTTCGCT GTTGCAGTAA
 
Protein sequence
MSEKTFLVEI GTEELPPKAL RSLAESFAAN FTAELDNAGL AHGTVQWFAA PRRLALKVAN 
LAEAQPDREI EKRGPAIAQA FDAEGKPSKA AEGWARGCGI TVDQAERLTT DKGEWLLYRA
HVKGESTEAL LPNMVATSLA KLPIPKLMRW GASDVHFVRP VHTVTLLLGD KVIPATILGI
QSDRVIRGHR FMGEPEFTID NADQYPEILR ERGKVIADYE ERKAKIKADA EEAARKIGGN
ADLSESLLEE VASLVEWPVV LTAKFEEKFL AVPSEALVYT MKGDQKYFPV YANDGKLLPN
FIFVANIESK DPQQIISGNE KVVRPRLADA EFFFNTDRKK RLEDNLPRLQ TVLFQQQLGT
LRDKTDRIQA LAGWIAEQIG ADVNHATRAG LLSKCDLMTN MVFEFTDTQG VMGMHYARHD
GEAEDVAVAL NEQYQPRFAG DDLPSNPVAC ALAIADKMDT LAGIFGIGQH PKGDKDPFAL
RRAALGVLRI IVEKNLNLDL QTLTEEAVRL YGDKLTNANV VDDVIDFMLG RFRAWYQDEG
YTVDTIQAVL ARRPTRPADF DARMKAVSHF RTLEAAAALA AANKRVSNIL AKSDEVLSDR
VNASTLKEPE EIKLAMQVVV LRDKLEPYFA EGRYQDALVE LAELREPVDA FFDKVMVMVD
DKELRINRLT MLEKLRELFL RVADISLLQ