Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_4929 |
Symbol | tkrA |
ID | 6972228 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 4567989 |
End bp | 4568963 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 643388612 |
Product | 2-ketogluconate reductase |
Protein accession | YP_002273039 |
Protein GI | 209395767 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 0.763267 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGCCGT CCGTTATCCT CTACAAAGCC TTACCTGATG ATTTACTGCA ACGCCTGCAA GAGCATTTCA CCGTTCACCA GGTGGCAAAC CTCAGCCCAC AAACCGTCGA ACAAAATGCA GCAATTTTTG CCGAAGCTGA AGGTTTACTG GGTTCAAACG AGAATGTTGA TGCCGCATTG CTGGAAAAAA TGCCGAAACT GCGTGCCACA TCAACGATCT CCGTCGGCTA TGACAATTTT GATGTCGATG CGCTTACCGC CCGAAAAATT CTGCTGATGC ACACGCCAAC CGTCTTAACA GAAACCGTCG CCGATACGCT GATGGCGCTG GTGTTGTCTA CCGCTCGTCG GGTTGTGGAG GTAGCAGAAC GGGTAAAAGC AGGCGAATGG ACCGCGAGCA TAGGCCCGGA CTGGTACGGC ACTGACGTTC ACCATAAAAC ACTGGGCATT GTCGGGATGG GACGGATCGG TATGGCGCTG GCACAACGTG CGCACTTTGG CTTCAACATG CCCATCCTCT ATAACGCGCG CCGCCACCAT AAAGAAGCAG AAGAACGCTT CAACGCCCGC TACTGCGATT TGGATACACT GTTACAAGAG TCAGATTTCG TTTGCCTGAT CCTGCCGTTA ACTGATGAGA CGCATCATCT GTTTGGCGCA GAACAATTCG CCAAAATGAA ATCCTCCGCC ATTTTCATTA ATGCCGGACG TGGCCCGGTG GTTGACGAAA ATGCACTGAT CGCAGCATTG CAGAAAGGGG AAATTCACGC CGCCGGGCTG GATGTCTTCG AACAAGAGCC ACTTTCCGTA GATTCGCCGT TGCTCTCAAT GGCCAACGTC GTCGCAGTAC CGCATATTGG ATCTGCCACC CATGAGACGC GTTATGGCAT GGCCGCCTGT GCCGTGGATA ATTTGATTGA TGCGTTACAA GGAAAGGTTG AGAAGAACTG TGTGAATCCG CACGTCGCGG ACTAA
|
Protein sequence | MKPSVILYKA LPDDLLQRLQ EHFTVHQVAN LSPQTVEQNA AIFAEAEGLL GSNENVDAAL LEKMPKLRAT STISVGYDNF DVDALTARKI LLMHTPTVLT ETVADTLMAL VLSTARRVVE VAERVKAGEW TASIGPDWYG TDVHHKTLGI VGMGRIGMAL AQRAHFGFNM PILYNARRHH KEAEERFNAR YCDLDTLLQE SDFVCLILPL TDETHHLFGA EQFAKMKSSA IFINAGRGPV VDENALIAAL QKGEIHAAGL DVFEQEPLSV DSPLLSMANV VAVPHIGSAT HETRYGMAAC AVDNLIDALQ GKVEKNCVNP HVAD
|
| |