| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_4817 |
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| Symbol | nikB |
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| ID | 6971103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 4452923 |
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| End bp | 4453867 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643388509 |
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| Product | nickel transporter permease NikB |
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| Protein accession | YP_002272937 |
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| Protein GI | 209400123 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | [TIGR02789] nickel ABC transporter, permease subunit NikB |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 74 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCGTT ACGTATTACG CCGCTTTCTG CTGCTGATCC CGATGGTGCT CGCCGCCTCG
GTGATCATTT TTCTGATGCT GCGCCTCGGT ACCGGCGACC CGGCGCTCGA TTATTTGCGT
CTGTCTAACC TGCCGCCGAC GCCGGAGATG CTGGCCTCTA CCCGCACCAT GCTGGGACTG
GATCAGCCGC TGTATGTGCA GTACGGCACC TGGTTGTGGA AGGCGCTGCA TCTTGATTTC
GGCATCTCAT TTGCCACGCA GCGCCCGGTG CTGGACGATA TGCTGAACTT CCTGCCCGCC
ACGCTGGAAC TGGCGGGTGC GGCGCTGGTA TTAATTCTGC TCACTTCCGT ACCGCTCGGT
ATCTGGGCGG CGCGCCATCG TGACCGTCTG CCGGATTTCG CCGTACGTTT CATCGCGTTT
CTCGGCGTGT CGATGCCCAA CTTCTGGCTG GCATTTTTAC TGGTGATGGC GTTTTCGGTG
TATCTGCAAT GGCTACCCGC GATGGGCTAC GGCGGCTGGC AGCACATCAT TTTGCCTGCG
GTTTCCATTG CCTTTATGTC GCTGGCGATT AACGCACGGC TGCTGCGCGC CAGTATGCTG
GACGTCGCCG GTCAGCGTCA CGTCACCTGG GCGCGGCTAC GCGGCCTGAA TGACAAACAG
ACCGAGCGTC GTCATATTCT GCGCAATGCC TCGCTGCCGA TGATCACCGC CGTGGGGATG
CACATTGGCG AACTGATTGG CGGGACGATG ATTATCGAAA ACATCTTTAC CTGGCCCGGC
GTCGGGCGCT ATGCGGTGTC GGCGATTTTT AACCGTGACT ATCCGGTGAT CCAGTGCTTT
ACGCTGATGA TGGTGGTGGT TTTTGTGGTC TGTAATTTGA TTGTCGATTT GCTCAACGCC
GCACTGGACC CACGCATTCG TCGTCATGAA GGAGCGCACG CGTGA
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| Protein sequence | MLRYVLRRFL LLIPMVLAAS VIIFLMLRLG TGDPALDYLR LSNLPPTPEM LASTRTMLGL
DQPLYVQYGT WLWKALHLDF GISFATQRPV LDDMLNFLPA TLELAGAALV LILLTSVPLG
IWAARHRDRL PDFAVRFIAF LGVSMPNFWL AFLLVMAFSV YLQWLPAMGY GGWQHIILPA
VSIAFMSLAI NARLLRASML DVAGQRHVTW ARLRGLNDKQ TERRHILRNA SLPMITAVGM
HIGELIGGTM IIENIFTWPG VGRYAVSAIF NRDYPVIQCF TLMMVVVFVV CNLIVDLLNA
ALDPRIRRHE GAHA
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