Gene ECH74115_4651 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_4651 
SymbolrpsL 
ID6968952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp4297164 
End bp4297538 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content53% 
IMG OID643388356 
Product30S ribosomal protein S12 
Protein accessionYP_002272784 
Protein GI209395851 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0048] Ribosomal protein S12 
TIGRFAM ID[TIGR00981] ribosomal protein S12, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.89179e-09 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.0331168 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACAG TTAACCAGCT GGTACGCAAA CCACGTGCTC GCAAAGTTGC GAAAAGCAAC 
GTGCCTGCGC TGGAAGCATG CCCGCAAAAA CGTGGCGTAT GTACTCGTGT ATATACTACC
ACTCCTAAAA AACCGAACTC CGCGCTGCGT AAAGTATGCC GTGTTCGTCT GACTAACGGT
TTCGAAGTGA CTTCCTACAT CGGTGGTGAA GGTCACAACC TGCAGGAGCA CTCCGTGATC
CTGATCCGTG GCGGTCGTGT TAAAGACCTC CCGGGTGTTC GTTACCACAC CGTACGTGGT
GCGCTTGACT GCTCCGGCGT TAAAGACCGT AAGCAGGCTC GTTCCAAGTA TGGCGTGAAG
CGTCCTAAGG CTTAA
 
Protein sequence
MATVNQLVRK PRARKVAKSN VPALEACPQK RGVCTRVYTT TPKKPNSALR KVCRVRLTNG 
FEVTSYIGGE GHNLQEHSVI LIRGGRVKDL PGVRYHTVRG ALDCSGVKDR KQARSKYGVK
RPKA