| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_4643 |
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| Symbol | rplC |
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| ID | 6969611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 4290389 |
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| End bp | 4291018 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 643388348 |
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| Product | 50S ribosomal protein L3 |
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| Protein accession | YP_002272776 |
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| Protein GI | 209398982 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0087] Ribosomal protein L3 |
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| TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000124545 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 0.0362623 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTGGTT TAGTCGGTAA AAAAGTGGGT ATGACCCGTA TCTTCACAGA AGACGGCGTT
TCTATCCCAG TAACCGTAAT CGAAGTTGAA GCAAACCGCG TTACTCAGGT TAAAGACCTG
GCTAACGATG GCTACCGTGC TATTCAGGTG ACCACCGGTG CTAAAAAAGC TAACCGTGTG
ACCAAGCCTG AAGCTGGCCA CTTCGCTAAA GCTGGCGTAG AAGCTGGCCG TGGTCTGTGG
GAATTCCGCC TGGCTGAAGG CGAAGAGTTC ACTGTAGGTC AGAGCATTAG CGTTGAACTG
TTTGCTGACG TTAAAAAAGT TGACGTAACT GGCACCTCTA AAGGTAAAGG TTTCGCAGGT
ACCGTTAAGC GCTGGAACTT CCGTACCCAA GACGCTACTC ACGGTAACTC CTTGTCTCAC
CGCGTTCCGG GTTCTATCGG TCAGAACCAG ACTCCGGGCA AAGTGTTCAA AGGCAAGAAA
ATGGCAGGTC AGATGGGTAA CGAACGTGTA ACCGTTCAGA GCCTTGACGT AGTACGCGTT
GACGCTGAGC GCAACCTGCT GCTGGTTAAA GGTGCTGTCC CGGGTGCAAC CGGTAGCGAC
CTGATCGTTA AACCAGCTGT GAAGGCGTAA
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| Protein sequence | MIGLVGKKVG MTRIFTEDGV SIPVTVIEVE ANRVTQVKDL ANDGYRAIQV TTGAKKANRV
TKPEAGHFAK AGVEAGRGLW EFRLAEGEEF TVGQSISVEL FADVKKVDVT GTSKGKGFAG
TVKRWNFRTQ DATHGNSLSH RVPGSIGQNQ TPGKVFKGKK MAGQMGNERV TVQSLDVVRV
DAERNLLLVK GAVPGATGSD LIVKPAVKA
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