Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_4604 |
Symbol | aroE |
ID | 6967240 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 4268112 |
End bp | 4268930 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 643388310 |
Product | shikimate 5-dehydrogenase |
Protein accession | YP_002272738 |
Protein GI | 209397484 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0169] Shikimate 5-dehydrogenase |
TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000305601 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAACCT ATGCTGTTTT TGGTAATCCG ATAGCCCACA GCAAATCGCC ATTCATTCAT CAGCAATTTG CTCAGCAACT GAATATTGAA CATCCCTATG GGCGCGTGTT GGCACCCATC AATGATTTCG TCAACACACT GAACGCTTTC TTTAGTGCTG GTGGTAAAGG TGCGAATGTG ACGGTGCCTT TTAAAGAAGA GGCTTTTGCC AGAGCGGATG AGCTTACTGA ACGCGCAGCG TTGGCTGGTG CTGTTAACAC CCTCAAGCGG TTAGAAGATG GACGCTTGCT GGGTGACAAT ACCGATGGTG TAGGCTTGTT AAGCGATCTG GAACGTCTGT CTTTTATCCG TCCTGGTTTA CGTATTCTGC TCATCGGCGC AGGTGGAGCA TCTCGCGGCG TACTACTGCC ACTTCTTTCC CTGGACTGTG CGGTGACAAT CACTAATCGG ACGGTATCCC GAGCGGAAGA GTTGGCTAAA TTGTTTGCGC ACACTGGCAG TATTCAGGCG TTGGGTATGG ACGAACTGGA AGGTCATGAG TTTGATCTCA TTATTAATGC CACATCCAGT GGCATCAGTG GTGATATTCC GGCGATCCCG TCATCGCTCA TTCATCCAGG CATTTATTGC TATGACATGT TCTATCAGAA AGGAAAAACT CCTTTTTTGG CATGGTGTGA GCAGCGAGGC TCAAAGCCTA CTGCTGATGG TTTAGGAATG CTGGTGGCAC AGGCGGCTCA TGCCTTCCTT CTTTGGCATG GCGTTCTGCC TGATGTAGAA CCAGTTATAA AGCAATTGCA GGAGGAATTG TCCGCGTGA
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Protein sequence | METYAVFGNP IAHSKSPFIH QQFAQQLNIE HPYGRVLAPI NDFVNTLNAF FSAGGKGANV TVPFKEEAFA RADELTERAA LAGAVNTLKR LEDGRLLGDN TDGVGLLSDL ERLSFIRPGL RILLIGAGGA SRGVLLPLLS LDCAVTITNR TVSRAEELAK LFAHTGSIQA LGMDELEGHE FDLIINATSS GISGDIPAIP SSLIHPGIYC YDMFYQKGKT PFLAWCEQRG SKPTADGLGM LVAQAAHAFL LWHGVLPDVE PVIKQLQEEL SA
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