| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_4561 |
|---|
| Symbol | tldD |
|---|
| ID | 6971208 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | - |
|---|
| Start bp | 4227584 |
|---|
| End bp | 4229029 |
|---|
| Gene Length | 1446 bp |
|---|
| Protein Length | 481 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 643388272 |
|---|
| Product | protease TldD |
|---|
| Protein accession | YP_002272707 |
|---|
| Protein GI | 209398830 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.657779 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 66 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCTTA ACCTGGTAAG TGAACAATTG CTAGCGGCGA ACGGCCTGAA ACATCAGGAC
TTGTTCGTGA TCCTCGGTCA ACTGGCCGAA CGTCGCCTTG ATTATGGCGA TCTCTATTTT
CAGTCGAGCT ATCACGAATC CTGGGTTTTA GAAGACCGCA TTATTAAAGA TGGTTCTTAC
AACATCGATC AGGGCGTTGG TGTGCGTGCA ATCAGCGGTG AAAAAACCGG ATTTGCTTAC
GCTGACCAAA TCAGCCTGCT GGCGCTGGAA CAGAGTGCGC AAGCGGCGCG CACCATCGCC
CGTGATAGCG GTGATGGCAA AGTACAGACG CTGGGCGCGG TAGAGCATAG CCCGTTGTAT
ACCTCGGTAG ATCCGCTGCA AAGCATGAGC CGTGAAGAGA AGCTGGATAT CCTGCGTCGC
GTCGATAAGG TTGCCCGCGA AGCGGACAAG CGCGTACAGG AAGTGACTGC CAGCCTCAGT
GGTGTCTATG AATTAATTCT GGTTGCGGCC ACCGACGGCA CGCTAGCGGC GGATGTCCGT
CCGCTGGTGC GTCTTTCCGT GAGCGTTCTG ATCGAAGAAG ATGGCAAACG CGAACGCGGT
GCCAGTGGCG GCGGCGGTCG TTTTGGTTAT GAGTTCTTCC TTGCCGATCT CGACGGCGAA
GTCCGTGCGG ATGCATGGGC AAAAGAAGCA GTACGTATGG CGCTGGTCAA TCTTTCTGCC
GTTGCTGCAC CAGCGGGCAC CATGCCGGTA GTACTTGGCG CAGGTTGGCC GGGCGTGCTG
TTGCATGAAG CGGTAGGTCA CGGTCTGGAA GGCGACTTCA ACCGCCGTGG CACTTCAGTA
TTTAGTGGAC AGGTCGGGGA GCTGGTGGCT TCAGAACTGT GTACCGTGGT TGATGACGGT
ACGATGGTCG ATCGCCGTGG TTCGGTGGCG ATTGATGACG AAGGTACGCC AGGCCAGTAC
AACGTGCTGA TTGAGAACGG CATTCTGAAA GGCTACATGC AGGATAAACT CAACGCGCGT
TTGATGGGGA TGACGCCGAC TGGCAACGGT CGCCGTGAAT CCTACGCCCA TCTGCCCATG
CCGCGTATGA CCAACACCTA TATGCTGCCG GGTAAATCGA CCCCGCAGGA AATTATTGAA
TCCGTTGAGT ACGGTATCTA TGCACCGAAC TTTGGTGGCG GTCAGGTGGA TATCACCTCC
GGCAAATTCG TTTTCTCCAC TTCAGAAGCA TATCTGATTG AAAACGGTAA AGTAACGAAG
CCGGTGAAAG GCGCAACGTT GATTGGTTCC GGTATCGAAA CCATGCAGCA GATTTCGATG
GTTGGCAACG ACCTGAAACT GGATAACGGC GTGGGTGTCT GCGGTAAAGA AGGGCAAAGT
TTGCCGGTTG GCGTGGGCCA GCCAACGCTG AAAGTTGATA ACCTGACTGT TGGCGGTACT
GCGTAA
|
|---|
| Protein sequence | MSLNLVSEQL LAANGLKHQD LFVILGQLAE RRLDYGDLYF QSSYHESWVL EDRIIKDGSY
NIDQGVGVRA ISGEKTGFAY ADQISLLALE QSAQAARTIA RDSGDGKVQT LGAVEHSPLY
TSVDPLQSMS REEKLDILRR VDKVAREADK RVQEVTASLS GVYELILVAA TDGTLAADVR
PLVRLSVSVL IEEDGKRERG ASGGGGRFGY EFFLADLDGE VRADAWAKEA VRMALVNLSA
VAAPAGTMPV VLGAGWPGVL LHEAVGHGLE GDFNRRGTSV FSGQVGELVA SELCTVVDDG
TMVDRRGSVA IDDEGTPGQY NVLIENGILK GYMQDKLNAR LMGMTPTGNG RRESYAHLPM
PRMTNTYMLP GKSTPQEIIE SVEYGIYAPN FGGGQVDITS GKFVFSTSEA YLIENGKVTK
PVKGATLIGS GIETMQQISM VGNDLKLDNG VGVCGKEGQS LPVGVGQPTL KVDNLTVGGT
A
|
|---|
| |