Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_4535 |
Symbol | gltB |
ID | 6967494 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 4198751 |
End bp | 4203304 |
Gene Length | 4554 bp |
Protein Length | 1517 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643388247 |
Product | glutamate synthase subunit alpha |
Protein accession | YP_002272682 |
Protein GI | 209396802 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0069] Glutamate synthase domain 2 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACGCA AACCCCGTCG CCACGCTCTT TCTGTGCCCG TGCGCAGCGG TTCGGAAGTG GGGTTCCCGC AGAGCCTGGG GGAGGTTCAC GATATGTTGT ACGATAAATC CCTTGAGAGG GATAACTGTG GTTTCGGCCT GATCGCCCAC ATAGAAGGCG AACCTAGCCA CAAGGTAGTG CGTACTGCAA TACACGCACT GGCCCGCATG CAGCACCGTG GCGCGATTCT CGCCGATGGT AAAACCGGTG ACGGTTGCGG CTTGCTGTTA CAAAAACCGG ATCGCTTTTT TCGCATCGTT GCGCAGGAGC GCGGCTGGCG TTTAGCGAAA AACTACGCCG TCGGGATGCT CTTCCTGAAT AAAGATCCTG AACTCGCCGC TGCCGCACGC CGCATCGTTG AAGAAGAGCT GCAACGCGAA ACCTTGTCGA TTGTGGGCTG GCGTGATGTC CCCACTAACG AAGGCGTGCT GGGTGAAATC GCCCTCTCCT CTCTGCCACG CATTGAGCAA ATTTTTGTGA ACGCCCCGGC AGGCTGGCGT CCGCGCGATA TGGAGCGCCG TCTGTTTATC GCCCGCCGCC GCATTGAAAA GCGTCTCGAA GCCGACAAAG ACTTCTACGT CTGTAGCCTG TCGAATCTGG TGAACATCTA TAAAGGTCTG TGTATGCCGG CGGATCTGCC GCGCTTTTAT CTAGATCTTG CGGACCTGCG TCTGGAATCG GCCATTTGCC TGTTCCACCA GCGCTTCTCC ACTAACACCG TACCGCGCTG GCCGCTGGCG CAACCGTTCC GCTACCTGGC GCATAACGGT GAAATCAACA CCATCACCGG TAACCGCCAA TGGGCGCGTG CGCGTACTTA TAAATTCCAG ACACCGCTTA TCCCTGACCT GCACGACGCC GCACCGTTCG TCAACGAAAT CGGCTCTGAC TCCAGTTCGA TGGATAACAT GCTGGAACTG CTGCTGGCAG GCGGGATGGA TATCATCCGC GCCATGCGTC TATTAGTACC ACCCGCCTGG CAGAACAACC CGGATATGGA CCCGGAACTG CGTGCCTTCT TTGACTTTAA CTCCATGCAT ATGGAGCCGT GGGATGGCCC GGCGGGCATC GTGATGTCTG ACGGTCGTTT TGCTGCCTGT AACCTCGACC GTAACGGTCT GCGTCCGGCG CGCTACGTCA TCACCAAAGA TAAGCTCATC ACCTGCGCCT CTGAAGTCGG TATCTGGGAT TACCAGCCTG ACGAAGTGGT CGAAAAAGGC CGCGTCGGGC CAGGCGAACT GATGGTAATC GACACTCGCA GTGGGCGTAT TCTGCACTCG GCAGAAACCG ATGACGATCT GAAAAGCCGC CACCCTTATA AAGAGTGGAT GGAGAAAAAC GTCCGCCGAC TGGTACCGTT TGAAGATCTG CCCGATGAAG AAGTGGGTAG CCGCGAACTG GACGACGACA CGCTTGCCAG CTACCAGAAA CAGTTTAACT ACAGCGCGGA AGAGCTGGAC TCCGTAATTC GCGTACTGGG CGAAAACGGT CAGGAAGCGG TCGGTTCGAT GGGCGATGAT ACCCCATTCG CCGTGCTCTC CAGTCAGCCG CGCATTATTT ACGACTACTT CCGCCAGCAG TTTGCCCAGG TGACTAACCC GCCAATCGAC CCGCTGCGTG AAGCGCATGT TATGTCGCTC GCCACCAGTA TCGGTCGTGA AATGAACGTC TTTTGCGAAG CAGAGGGCCA GGCGCACCGT TTAAGCTTTA AATCGCCGAT TCTGCTCTAC TCCGATTTCA AACAGCTCAC GACGATGAAA GAGGAGCACT ACCGCGCAGA TACGCTGGAT ATCACCTTTG ACGTCACCAA AACCACGCTC GAAGCGACGG TCAAAGAGCT GTGCGACAAA GCCGAAAAAA TGGTACGTAG CGGCACCGTG CTGCTGGTGC TCTCCGACCG GAATATCGCT AAAGATCGCC TGCCGGTTCC GGCTCCAATG GCGGTTGGCG CGATCCAGAC CCGTCTGGTC GATCAAAGCC TGCGTTGCGA TGCCAACATC ATCGTCGAAA CCGCCAGCGC CCGCGATCCG CACCACTTCG CCGTGTTGCT GGGTTTCGGC GCGACGGCTA TTTATCCGTA CCTTGCCTAT GAAACGCTGG GCCGCCTGGT AGACACCCAC GCGATTGCCA AAGATTATCG TACCGTGATG CTCAACTACC GTAACGGCAT CAACAAAGGC TTGTACAAAA TCATGTCCAA AATGGGCATC TCCACCATCG CCTCTTACCG CTGCTCGAAA CTGTTTGAAG CGGTCGGTCT GCACAATGAT GTAGTGGGCC TGTGCTTCCA GGGGGCGGTC AGCCGCATTG GGGGGGCGAG CTTTGAAGAC TTCCAGCAGG ATCTGCTGAA TCTCTCGAAA CGAGCCTGGC TGGCGCGCAA GCCCATCAGC CAGGGCGGCC TGCTGAAATA CGTCCACGGC GGCGAATACC ACGCCTACAA CCCGGACGTG GTGCGCACGC TGCAACAGGC GGTACAGAGC GGCGAGTATA GCGACTATCA GGAATACGCG AAGCTGGTTA ATGAGCGTCC GGCAACCACG CTGCGCGATC TGCTGGCAAT TACGCCGGGT GAAAACGCGG TCAACATTGC CGATGTTGAA CCGGCAAGCG AACTGTTTAA ACGCTTCGAT ACCGCGGCGA TGTCTATCGG CGCGTTAAGC CCGGAAGCCC ACGAGGCGCT GGCGGAAGCG ATGAACAGCA TCGGCGGAAA CTCGAACTCC GGTGAAGGTG GTGAAGACCC GGCGCGCTAC GGCACCAACA AAGTGTCGCG CATCAAGCAG GTGGCTTCCG GTCGCTTTGG GGTTACTCCG GCGTATCTGG TCAATGCCGA CGTCATTCAG ATTAAAGTCG CCCAGGGCGC GAAGCCGGGC GAAGGCGGTC AGTTGCCGGG CGACAAAGTC ACTCCTTACA TTGCCAAACT GCGCTATTCG GTGCCGGGCG TGACGCTGAT CTCCCCGCCG CCGCACCACG ATATCTACTC TATCGAAGAC TTAGCGCAGC TCATTTTCGA CCTCAAGCAG GTTAACCCGA AAGCGATGAT CTCCGTGAAG CTGGTTTCCG AACCGGGCGT TGGCACCATC GCCACCGGTG TGGCGAAAGC TTATGCCGAT TTAATCACCA TCGCAGGCTA TGACGGCGGC ACCGGCGCAA GTCCGCTTTC ATCGGTGAAA TACGCAGGCT GTCCGTGGGA GCTGGGACTT GTTGAAACAC AACAGGCGCT GGTTGCCAAC GGCTTGCGTC ATAAAATCCG TTTGCAGGTC GATGGCGGCC TGAAAACGGG TGTCGATATC ATCAAAGCGG CGATTCTCGG CGCAGAAAGC TTCGGCTTCG GCACTGGCCC AATGGTCGCG CTCGGCTGTA AATATCTGCG TATTTGCCAC CTGAACAACT GCGCAACGGG TGTGGCAACT CAGGATGACA AACTGCGTAA GAATCACTAT CACGGCCTGC CGTTCAAGGT GACGAATTAC TTTGAGTTTA TCGCCCGTGA AACCCGCGAG CTGATGGCAC AGCTTGGCGT AACACGTCTG GTGGATCTGA TTGGTCGCAC CGACCTGCTG AAAGAGCTGG ACGGTTTCAC CGCCAAACAG CAGAAACTGG CGCTGTCGAA GCTGCTGGAG ACCGCCGAAC CGCATCCAGG TAAGGCACTC TACTGCACCG AAACCAACCC GCCGTTTGAT AACGGCCTGC TGAACGCGCA GTTGCTGCAA CAGGCGAAAC CGTTTGTCGA TGAGCGCCAG AGCAAAACCT TCTGGTTCGA TATCCGCAAC ACCGACCGCT CTGTCGGCGC GTCGCTTTCA GGCTATATCG CCCAGACGCA CGGCGATCAG GGGCTGGCAG CCGATCCGAT TAAAGCGTAC TTCAACGGCA CCGCAGGCCA GAGCTTCGGC GTGTGGAACG CGGGCGGCGT GGAACTGTAC CTGACCGGTG ATGCCAACGA CTATGTCGGT AAAGGCATGG CGGGCGGCTT AATCGCCATT CGTCCTCCGG TTGGTTCCGC CTTCCGCAGC CATGAAGCAA GTATTATCGG CAACACCTGC CTGTATGGAG CGACGGGTGG TCGTCTGTAT GCCGCAGGCC GCGCGGGTGA ACGTTTCGGC GTGCGTAACT CCGGTGCAAT CACCGTGGTA GAAGGCATTG GCGACAACGG CTGTGAATAT ATGACGGGCG GTATCGTCTG TATTCTGGGT AAAACCGGCG TTAACTTCGG TGCGGGTATG ACCGGCGGCT TCGCTTACGT TCTCGATGAA AGCGGCGATT TCCGCAAACG CGTTAACCCG GAACTGGTGG AAGTATTAAG CGTTGACGAT TTGGCGATCC ATGAAGAGCA TCTGCGTGGT CTTATCACCG AGCATGTGCA GCATACCGGT TCCCAGCGTG GTGAAGAGAT TCTGGCGAAC TGGTCAACCT TCGCCACTAA ATTTGCGCTG GTTAAACCGA AGTCCAGTGA TGTCAAAGCA CTGCTGGGTC ATCGTAGTCG TAGCGCAGCA GAGTTGCGCG TGCAGGCGCA GTAA
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Protein sequence | MTRKPRRHAL SVPVRSGSEV GFPQSLGEVH DMLYDKSLER DNCGFGLIAH IEGEPSHKVV RTAIHALARM QHRGAILADG KTGDGCGLLL QKPDRFFRIV AQERGWRLAK NYAVGMLFLN KDPELAAAAR RIVEEELQRE TLSIVGWRDV PTNEGVLGEI ALSSLPRIEQ IFVNAPAGWR PRDMERRLFI ARRRIEKRLE ADKDFYVCSL SNLVNIYKGL CMPADLPRFY LDLADLRLES AICLFHQRFS TNTVPRWPLA QPFRYLAHNG EINTITGNRQ WARARTYKFQ TPLIPDLHDA APFVNEIGSD SSSMDNMLEL LLAGGMDIIR AMRLLVPPAW QNNPDMDPEL RAFFDFNSMH MEPWDGPAGI VMSDGRFAAC NLDRNGLRPA RYVITKDKLI TCASEVGIWD YQPDEVVEKG RVGPGELMVI DTRSGRILHS AETDDDLKSR HPYKEWMEKN VRRLVPFEDL PDEEVGSREL DDDTLASYQK QFNYSAEELD SVIRVLGENG QEAVGSMGDD TPFAVLSSQP RIIYDYFRQQ FAQVTNPPID PLREAHVMSL ATSIGREMNV FCEAEGQAHR LSFKSPILLY SDFKQLTTMK EEHYRADTLD ITFDVTKTTL EATVKELCDK AEKMVRSGTV LLVLSDRNIA KDRLPVPAPM AVGAIQTRLV DQSLRCDANI IVETASARDP HHFAVLLGFG ATAIYPYLAY ETLGRLVDTH AIAKDYRTVM LNYRNGINKG LYKIMSKMGI STIASYRCSK LFEAVGLHND VVGLCFQGAV SRIGGASFED FQQDLLNLSK RAWLARKPIS QGGLLKYVHG GEYHAYNPDV VRTLQQAVQS GEYSDYQEYA KLVNERPATT LRDLLAITPG ENAVNIADVE PASELFKRFD TAAMSIGALS PEAHEALAEA MNSIGGNSNS GEGGEDPARY GTNKVSRIKQ VASGRFGVTP AYLVNADVIQ IKVAQGAKPG EGGQLPGDKV TPYIAKLRYS VPGVTLISPP PHHDIYSIED LAQLIFDLKQ VNPKAMISVK LVSEPGVGTI ATGVAKAYAD LITIAGYDGG TGASPLSSVK YAGCPWELGL VETQQALVAN GLRHKIRLQV DGGLKTGVDI IKAAILGAES FGFGTGPMVA LGCKYLRICH LNNCATGVAT QDDKLRKNHY HGLPFKVTNY FEFIARETRE LMAQLGVTRL VDLIGRTDLL KELDGFTAKQ QKLALSKLLE TAEPHPGKAL YCTETNPPFD NGLLNAQLLQ QAKPFVDERQ SKTFWFDIRN TDRSVGASLS GYIAQTHGDQ GLAADPIKAY FNGTAGQSFG VWNAGGVELY LTGDANDYVG KGMAGGLIAI RPPVGSAFRS HEASIIGNTC LYGATGGRLY AAGRAGERFG VRNSGAITVV EGIGDNGCEY MTGGIVCILG KTGVNFGAGM TGGFAYVLDE SGDFRKRVNP ELVEVLSVDD LAIHEEHLRG LITEHVQHTG SQRGEEILAN WSTFATKFAL VKPKSSDVKA LLGHRSRSAA ELRVQAQ
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