Gene ECH74115_4526 details

Gene Information

• Locus tag: ECH74115_4526
• Symbol: ptsN
• ID: 6967802
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli O157:H7 str. EC4115
• Kingdom: Bacteria
• Replicon accession: NC_011353
• Strand: +
• Start bp: 4190698
• End bp: 4191189
• Gene Length: 492 bp
• Protein Length: 163 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 643388239
• Product: PTS system transporter subunit IIA-like nitrogen-regulatory protein PtsN
• Protein accession: YP_002272674
• Protein GI: 209396068
• COG category: [G] Carbohydrate transport and metabolism; [T] Signal transduction mechanisms
• COG ID: [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)
• TIGRFAM ID: [TIGR01419] PTS IIA-like nitrogen-regulatory protein PtsN

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 58
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACAAATA ATGATACAAC TCTACAGCTT AGCAGTGTTC TTAACAGGGA ATGTACGCGA 
AGCCGCGTCC ACTGTCAGAG CAAAAAACGC GCCCTGGAAA TCATCAGCGA GCTGGCGGCG 
AAACAACTTA GCCTACCGCC TCAGGTGGTT TTTGAAGCTA TCCTGACGCG GGAAAAAATG 
GGCAGTACCG GTATCGGCAA TGGTATTGCC ATTCCGCATG GCAAACTGGA AGAAGATACT 
CTGCGTGCCG TTGGCGTTTT CGTTCAGCTC GAAACGCCTA TAGCTTTCGA TGCCATCGAC 
AACCAACCGG TGGACTTACT TTTTGCCCTG CTGGTGCCGG CAGACCAAAC TAAAACGCAC 
CTGCATACTC TGTCGCTGGT GGCGAAACGT CTGGCGGACA AAACCATCTG CCGCCGTTTA 
CGCGCAGCCC AGAGCGATGA AGAGCTGTAT CAAATCATTA CGGATACCAA AGGTACTCCG 
GATGAAGCGT AG 

 

Protein sequence

MTNNDTTLQL SSVLNRECTR SRVHCQSKKR ALEIISELAA KQLSLPPQVV FEAILTREKM 
GSTGIGNGIA IPHGKLEEDT LRAVGVFVQL ETPIAFDAID NQPVDLLFAL LVPADQTKTH 
LHTLSLVAKR LADKTICRRL RAAQSDEELY QIITDTKGTP DEA