| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_4487 |
|---|
| Symbol | truB |
|---|
| ID | 6966718 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | - |
|---|
| Start bp | 4156097 |
|---|
| End bp | 4157041 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 643388200 |
|---|
| Product | tRNA pseudouridine synthase B |
|---|
| Protein accession | YP_002272637 |
|---|
| Protein GI | 209399467 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0130] Pseudouridine synthase |
|---|
| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 64 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCGTC CTCGTCGTCG CGGTCGCGAC ATTAACGGCG TTTTGTTGCT GGATAAACCG
CAGGGTATGT CCAGCAACGA TGCGCTGCAA AAAGTGAAAC GTATATATAA CGCCAATCGT
GCCGGGCATA CCGGTGCGCT GGACCCGCTG GCGACCGGCA TGTTGCCGAT TTGCCTCGGG
GAAGCGACGA AGTTTTCCCA GTATCTGCTG GACTCCGACA AACGCTATCG GGTCATTGCG
CGTCTTGGAC AGCGTACCGA TACTTCTGAC GTCGACGGAC AAATCGTTGA AGAGCGTCCG
GTAACCTTTA GTGCAGAACA ACTGGCGGCG GCACTGGATA CTTTCCGTGG CGATATCGAA
CAGATCCCAT CGATGTATTC AGCACTGAAA TACCAGGGCA AAAAACTGTA CGAATATGCG
CGTCAGGGCA TTGAAGTTCC GCGTGAAGCG CGTCCAATTA CCGTTTATGA ATTGCTGTTT
ATTCGCCATG AAGGCAATGA GCTGGAGCTG GAAATTCACT GCTCAAAAGG CACTTATATC
CGCACCATCA TTGATGACCT GGGTGAAAAA CTCGGCTGTG GCGCGCATGT GATTTACCTG
CGTCGTCTGG CGGTAAGTAA ATATCCGGTT GAACGGATGG TGACCCTGGA GCACCTGCGT
GAACTGGTCG AACAAGCCGA ACAGCAGGAT ATTCCGGCTG CGGAGTTGCT TGATCCATTA
CTGATGCCAA TGGACAGTCC AGCTTCGGAC TACCCGGTGG TGAATCTTCC GTTAACGTCT
TCTGTTTACT TCAAAAATGG TAACCCGGTT CGTACATCTG GCGCGCCGCT GGAAGGACTG
GTTCGCGTTA CGGAAGGTGA GAACGGCAAG TTTATCGGTA TGGGCGAAAT TGACGATGAA
GGCCGCGTTG CGCCTCGTCG TCTGGTGGTT GAATACCCGG CGTAA
|
|---|
| Protein sequence | MSRPRRRGRD INGVLLLDKP QGMSSNDALQ KVKRIYNANR AGHTGALDPL ATGMLPICLG
EATKFSQYLL DSDKRYRVIA RLGQRTDTSD VDGQIVEERP VTFSAEQLAA ALDTFRGDIE
QIPSMYSALK YQGKKLYEYA RQGIEVPREA RPITVYELLF IRHEGNELEL EIHCSKGTYI
RTIIDDLGEK LGCGAHVIYL RRLAVSKYPV ERMVTLEHLR ELVEQAEQQD IPAAELLDPL
LMPMDSPASD YPVVNLPLTS SVYFKNGNPV RTSGAPLEGL VRVTEGENGK FIGMGEIDDE
GRVAPRRLVV EYPA
|
|---|
| |