| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_4425 |
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| Symbol | tdcG |
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| ID | 6968769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 4100997 |
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| End bp | 4102367 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643388146 |
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| Product | L-serine ammonia-lyase TdcG |
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| Protein accession | YP_002272583 |
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| Protein GI | 209397049 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1760] L-serine deaminase |
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| TIGRFAM ID | [TIGR00719] L-serine dehydratase, iron-sulfur-dependent, beta subunit
[TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.0305436 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGATATGA TTAGTGCATT CGATATTTTC AAAATTGGGA TTGGTCCCTC CAGTTCGCAT
ACCGTGGGGC CAATGAATGC CGGAAAAAGT TTTATTGATC GGCTGGAAAG TAGCGGCTTA
TTAACCGCGA CGAGCCATAT TGTGGTCGAT CTGTACGGGT CGTTGTCACT GACGGGCAAA
GGCCATGCCA CGGATGTCGC CATCATCATG GGACTGGCAG GAAACAGTCC GCAGGATGTT
GTCATTGATG AGATCCCTGC ATTTATAGAG TTAGTAACGC GCAGCGGGCG GCTGCCAGTG
GCATCTGGTG CGCATATTGT TGATTTTCCT GTAGCAAAGA ACATTATCTT CCATCCCGAA
ATGTTGCCTC GCCATGAGAA CGGAATGCGG ATCACTGCCT GGAAGGCACA GGAAGAGCTA
TTAAGTAAAA CCTATTACTC TGTCGGCGGC GGGTTTATTG TCGAAGAAGA ACACTTCGGC
CTGTCGCACG ATGTCGAAAC ACCCGTACCT TACGATTTCC ACTCAGCAGG TGAACTGCTG
AAAATGTGTG ATTACAACGG CCTGTCTATT TCTGGCCTGA TGATGCACAA CGAGCTAGCG
CTGCGCAGTA AAGCGGAAAT TGACGCCGGT TTTGCCCGTA TCTGGCAAGT GATGCATGAC
GGTATTGAAC GCGGGATGAA CACTGAAGGC GTGCTGCCTG GTCCGCTCAA TGTGCCGCGC
CGTGCCGTAG CGCTGCGTCG TCAGCTGGTT TCCAGCGATA ACATCTCTAA CGATCCGATG
AATGTCATCG ACTGGATCAA CATGTACGCG CTGGCGGTTA GTGAAGAAAA CGCAGCTGGC
GGGCGCGTGG TAACGGCACC GACTAACGGT GCGTGCGGCA TTATTCCGGC AGTGCTGGCT
TATTACGATA AGTTCCGTCG TCCGGTAAAC GAGCGGTCAA TTGCCCGCTA TTTTCTTGCA
GCCGGGGCTA TTGGCGCGCT GTATAAAATG AACGCCTCCA TCTCTGGCGC GGAGGTCGGC
TGTCAGGGGG AGATTGGCGT GGCCTGTTCA ATGGCGGCGG CAGGGTTAAC TGAACTACTG
GGCGGCAGTC CGGCGCAGGT ATGCAATGCG GCGGAAATCG CGATGGAGCA TAACCTTGGA
CTGACCTGCG ATCCGGTTGC CGGACAGGTA CAAATCCCGT GCATTGAACG TAATGCCATT
AATGCCGTGA AAGCAGTAAA CGCCGCGCGG ATGGCGATGC GCCGCACCTC GGCACCGCGT
GTTTCACTCG ATAAAGTGAT CGAGACGATG TATGAAACCG GCAAAGATAT GAACGATAAA
TACCGCGAAA CATCACGCGG CGGACTGGCC ATTAAAGTGG TCTGCGGCTG A
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| Protein sequence | MDMISAFDIF KIGIGPSSSH TVGPMNAGKS FIDRLESSGL LTATSHIVVD LYGSLSLTGK
GHATDVAIIM GLAGNSPQDV VIDEIPAFIE LVTRSGRLPV ASGAHIVDFP VAKNIIFHPE
MLPRHENGMR ITAWKAQEEL LSKTYYSVGG GFIVEEEHFG LSHDVETPVP YDFHSAGELL
KMCDYNGLSI SGLMMHNELA LRSKAEIDAG FARIWQVMHD GIERGMNTEG VLPGPLNVPR
RAVALRRQLV SSDNISNDPM NVIDWINMYA LAVSEENAAG GRVVTAPTNG ACGIIPAVLA
YYDKFRRPVN ERSIARYFLA AGAIGALYKM NASISGAEVG CQGEIGVACS MAAAGLTELL
GGSPAQVCNA AEIAMEHNLG LTCDPVAGQV QIPCIERNAI NAVKAVNAAR MAMRRTSAPR
VSLDKVIETM YETGKDMNDK YRETSRGGLA IKVVCG
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