| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_4269 |
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| Symbol | speC |
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| ID | 6971314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 3953011 |
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| End bp | 3955146 |
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| Gene Length | 2136 bp |
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| Protein Length | 711 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643388007 |
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| Product | ornithine decarboxylase |
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| Protein accession | YP_002272446 |
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| Protein GI | 209399569 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.783257 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCAA TGAATATTGC CGCCAGTAGT GAACTGGTAT CCCGACTTTC TACTCATCGC
CGCGTGGTGG CGTTGGGAGA TACTGATTTT ACGGACGTCG CGGCAGTCGT CATTACCGCT
GCGGATAGTC GCAGTGGCAT TCTTACGTTG CTTAAGCGCA CCGGTTTTCA TCTACCGGTG
TTTTTGTATT CCGAACATGC TGTTGAATTA CCTGCGGGCG TTACGGCGGT AATCAACGGC
AACGAGCAGC AGTGGCTGGA GCTGGAATCC GCAGCCTGTC AGTATGAAGA GAATTTGCTG
CCACCGTTTT ATGACACGCT GACGCAGTAC GTTGAGATGG GCAACAGCAC CTTTGCTTGC
CCTGGACATC AACATGGTGC GTTCTTTAAA AAGCATCCTG CCGGACGCCA TTTTTACGAT
TTCTTTGGTG AGAACATCTT TCGCGCCGAT ATGTGTAACG CTGACGTAAA ATTGGGCGAT
CTGCTTATTC ATGAAGGATC GGCGAAAGAT GCGCAGAAAT TCGCAGCCAA AGTCTTTCAT
GCCGATAAAA CCTATTTTGT GCTGAACGGC ACATCGGCAG CGAATAAAGT GGTGACGAAT
GCGCTGTTAA CGCGTGGCGA TCTGGTGCTC TTTGACCGTA ACAACCATAA GTCGAATCAT
CACGGCGCGT TGATTCAGGC GGGGGCGACG CCGGTCTATC TGGAAGCTTC ACGTAACCCG
TTTGGTTTCA TTGGCGGTAT TGATGCGCAC TGTTTTAATG AAGAGTATCT GCGCCAGCAA
ATTCGCGACG TTGCGCCAGA AAAAGCCGAC CTGCCGCGCC CGTTTCGCCT GGCGATTATT
CAGCTGGGAA CCTATGACGG CACTGTCTAT AACGCCCGTC AGGTGATCGA TACCGTTGGG
CATCTGTGTG ATTACATTCT GTTTGATTCC GCGTGGGTCG GTTATGAACA ATTTATCCCG
ATGATGGCGG ATAGCTCGCC GCTGCTGTTA GAACTTAACG AAAACGATCC GGGGATCTTT
GTGACTCAGT CGGTGCACAA ACAGCAGGCG GGATTCTCAC AGACGTCGCA GATCCATAAA
AAAGATAACC ATATCCGCGG ACAGGCGCGT TTTTGCCCGC ATAAGCGGTT GAATAACGCC
TTTATGCTCC ATGCTTCTAC CAGCCCTTTC TATCCGCTGT TTGCTGCACT GGATGTTAAC
GCCAAAATTC ATGAAGGGGA GAGTGGGCGT CGGCTGTGGG CTGAGTGCGT TGAGTTGGGT
ATTGAGTCGC GCAAGGCTAT TCTTGCGCGC TGTAAGCTGT TCCGCCCGTT TATCCCGCCC
GTTGTTGATG GCAAATTGTG GCAGGATTAT CCGACATCAG TGTTAGCCAG CGACCGTCGT
TTTTTCAGTT TTGAGCCGGG GGCGAAGTGG CACGGCTTTG AAGGATATGC CGCGGATCAG
TATTTTGTTG ATCCGTGCAA GCTGTTACTC ACTACACCAG GTATCGATGC CGAAACCGGC
GAATATAGCG ACTTTGGCGT TCCGGCGACG ATTCTGGCGC ACTATCTGCG TGAGAACGGC
ATTGTGCCGG AGAAGTGCGA TCTCAATTCC ATTCTGTTCT TATTAACTCC GGCGGAAAGC
CACGAGAAGC TGGCACAACT GGTGGCGATG CTGGCTCAAT TTGAACAGCA TATTGAGGAT
GACTCGCCGC TGGCTGAGGT GTTGCCGAGC GTTTATAACA AATATCCGGT GCGCTATCGC
GACTACACCC TGCGCCAGTT GTGTCAGGAG ATGCACGATC TGTATGTCAG TTTCGACGTC
AAAGACCTAC AAAAAGCGAT GTTCCGCCAG CAGAGTTTCC CGTCAGTGGT GATGAACCCC
CAGGATGCGC ATAGCGCTTA TATTCGCGGT GACGTGGAGT TGGTGCGGAT TCGTGATGCC
GAAGGGCGAA TTGCGGCAGA AGGGGCGTTG CCTTATCCAC CTGGCGTGCT TTGCGTGGTA
CCCGGGGAAG TCTGGGGTGG GGCGGTTCAA CGTTATTTCC TTGCACTGGA AGAAGGGGTG
AATTTGTTGC CGGGATTTTC GCCGGAGCTG CAAGGTGTTT ATAGCGAAAC CGATGCGGAT
GGCATGAAAC GGTTGTACGG TTATGTGTTG AAGTAA
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| Protein sequence | MKSMNIAASS ELVSRLSTHR RVVALGDTDF TDVAAVVITA ADSRSGILTL LKRTGFHLPV
FLYSEHAVEL PAGVTAVING NEQQWLELES AACQYEENLL PPFYDTLTQY VEMGNSTFAC
PGHQHGAFFK KHPAGRHFYD FFGENIFRAD MCNADVKLGD LLIHEGSAKD AQKFAAKVFH
ADKTYFVLNG TSAANKVVTN ALLTRGDLVL FDRNNHKSNH HGALIQAGAT PVYLEASRNP
FGFIGGIDAH CFNEEYLRQQ IRDVAPEKAD LPRPFRLAII QLGTYDGTVY NARQVIDTVG
HLCDYILFDS AWVGYEQFIP MMADSSPLLL ELNENDPGIF VTQSVHKQQA GFSQTSQIHK
KDNHIRGQAR FCPHKRLNNA FMLHASTSPF YPLFAALDVN AKIHEGESGR RLWAECVELG
IESRKAILAR CKLFRPFIPP VVDGKLWQDY PTSVLASDRR FFSFEPGAKW HGFEGYAADQ
YFVDPCKLLL TTPGIDAETG EYSDFGVPAT ILAHYLRENG IVPEKCDLNS ILFLLTPAES
HEKLAQLVAM LAQFEQHIED DSPLAEVLPS VYNKYPVRYR DYTLRQLCQE MHDLYVSFDV
KDLQKAMFRQ QSFPSVVMNP QDAHSAYIRG DVELVRIRDA EGRIAAEGAL PYPPGVLCVV
PGEVWGGAVQ RYFLALEEGV NLLPGFSPEL QGVYSETDAD GMKRLYGYVL K
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