Gene ECH74115_4072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_4072 
SymbolgcvA 
ID6969824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp3768447 
End bp3769364 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content49% 
IMG OID643387831 
ProductDNA-binding transcriptional activator GcvA 
Protein accessionYP_002272274 
Protein GI209400092 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.56513e-08 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones79 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAAAC GATTACCACC GCTAAATGCC TTACGAGTTT TTGATGCCGC AGCACGCCAT 
TTAAGTTTCA CTCGCGCAGC AGAAGAGCTT TTTGTGACCC AGGCCGCAGT AAGTCATCAA
ATCAAGTCTC TTGAGGATTT TTTGGGGCTA AAACTGTTCC GCCGCCGTAA TCGTTCACTC
CTGCTGACCG AGGAAGGGCA AAGCTATTTC CTCGATATCA AAGAGATATT TTCGCAATTA
ACCGAAGCGA CGCGTAAACT CCAGGCCCGT AGCGCCAAGG GGGCGTTGAC GGTCAGTTTA
CTCCCCAGTT TCGCCATTCA TTGGTTGGTT CCGCGACTTT CCAGCTTTAA TTCAGCTTAT
CCGGGAATTG ACGTTCGAAT CCAGGCGGTT GATCGTCAGG AAGATAAGCT GGCGGATGAT
GTTGATGTGG CGATATTTTA TGGTCGGGGC AACTGGCCGG GGCTACGGGT GGAAAAACTG
TACGCCGAAT ATTTATTGCC GGTGTGTTCG CCGCTACTGC TGACTGGCGA AAAACCCTTG
AAGACCCCGG AAGATCTGGC TAAACATACG TTATTACATG ATGCGTCACG CCGTGACTGG
CAGACATATA CTCGTCAATT GGGGTTAAAT CATATCAACG TTCAGCAAGG GCCAATTTTT
AGCCATAGCG CCATGGTGCT GCAAGCGGCT ATTCACGGGC AGGGAGTGGC GCTGGCAAAT
AACGTGATGG CGCAATCTGA AATTGAAGCC GGACGTCTTG TTTGCCCGTT TAATGATGTT
CTGGTCAGTA AAAACGCTTT TTATCTGGTT TGTCATGACA GCCAGGCAGA ACTGGGTAAA
ATAGCCGCCT TTCGCCAATG GATCCTGGCG AAAGCCGCTG CTGAACAAGA AAAATTCCGC
TTTCGTTATG AACAATAA
 
Protein sequence
MSKRLPPLNA LRVFDAAARH LSFTRAAEEL FVTQAAVSHQ IKSLEDFLGL KLFRRRNRSL 
LLTEEGQSYF LDIKEIFSQL TEATRKLQAR SAKGALTVSL LPSFAIHWLV PRLSSFNSAY
PGIDVRIQAV DRQEDKLADD VDVAIFYGRG NWPGLRVEKL YAEYLLPVCS PLLLTGEKPL
KTPEDLAKHT LLHDASRRDW QTYTRQLGLN HINVQQGPIF SHSAMVLQAA IHGQGVALAN
NVMAQSEIEA GRLVCPFNDV LVSKNAFYLV CHDSQAELGK IAAFRQWILA KAAAEQEKFR
FRYEQ