| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_4061 |
|---|
| Symbol | sdaB |
|---|
| ID | 6968449 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | + |
|---|
| Start bp | 3756373 |
|---|
| End bp | 3757740 |
|---|
| Gene Length | 1368 bp |
|---|
| Protein Length | 455 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643387820 |
|---|
| Product | L-serine ammonia-lyase 2 |
|---|
| Protein accession | YP_002272263 |
|---|
| Protein GI | 209396781 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1760] L-serine deaminase |
|---|
| TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.830001 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 73 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTAGCG TATTCGATAT TTTCAAAATC GGCATTGGCC CTTCCAGTTC TCATACCGTT
GGACCAATGA AAGCGGGTAA ACAATTTACC GACGATCTGA TTGCCCGTAA CCTGCTTAAA
GACGTGACCC GCGTGGTGGT TGACGTGTAC GGCTCGCTCT CTCTGACTGG TAAAGGCCAC
CACACTGATA TCGCCATTAT TATGGGCCTG GCGGGTAACC TGCCGGATAC CGTGGATATC
GATTCCATCC CTGGTTTTAT TCAGGATGTG AATACTCATG GTCGCCTGAT GCTGGCAAAC
GGTCAGCATG AAGTGGAGTT CCCGGTTGAT CAGTGCATGA ACTTCCATGC CGACAACCTT
TCTCTGCATG AAAACGGTAT GCGCATTACC GCGCTGGCGG GTGATAAAGT CGTTTACAGT
CAGACTTACT ACTCTATTGG CGGTGGCTTT ATCGTTGATG AAGAGCATTT TGGCCAGCAG
GATAGCGCAC CGGTTGAAGT TCCTTATCCG TACAGTTCAG CAGCCGATCT GCAAAAACAT
TGTCAGGAAA CCGGGCTGTC ACTCTCTGGC CTGATGATGA AAAACGAGCT GGCGCTGCAC
AGCAAAGAAG AGCTGGAACA GCACCTGGCG AACGTCTGGG AAGTGATGTG TGGCGGTATT
GAGCGCGGTA TTTCCACCGA AGGTGTGTTA CCTGGCAAAC TGCGTGTTCC ACGCCGTGCT
GCGGCACTAC GCCGGATGCT GGTCAGCCAG GATAAAACCA CCACTGACCC GATGGCGGTT
GTTGACTGGA TCAACATGTT TGCACTGGCA GTGAACGAAG AGAACGCTGC TGGCGGTCGC
GTGGTGACTG CGCCGACTAA CGGTGCGTGC GGGATTATCC CGGCAGTGCT GGCGTACTAC
GATAAGTTTA TCCGCGAAGT GAACGCTAAC TCACTGGCTC GTTACCTGCT GGTAGCCAGC
GCCATTGGTT CTCTTTATAA GATGAACGCG TCGATTTCTG GTGCCGAAGT GGGTTGCCAG
GGTGAAGTTG GTGTGGCGTG CTCAATGGCG GCGGCTGGTC TGGCAGAACT GTTAGGTGCA
AGCCCGGCGC AGGTGTGCAT CGCGGCGGAA ATCGCCATGG AGCACAACCT CGGTCTGACG
TGTGACCCGG TCGCCGGACA GGTACAGGTG CCATGCATCG AGCGTAACGC CATTGCGGCA
GTAAAAGCGG TGAACGCCGC ACGTATGGCG CTGCGCCGTA CCAGCGAGCC GCGCGTCTGC
CTCGATAAAG TTATCGAAAC CATGTACGAA ACAGGTAAAG ATATGAACGC CAAGTACCGC
GAAACCTCTC GCGGCGGCCT GGCAATGAAG ATCGTTGCCT GCGATTAA
|
|---|
| Protein sequence | MISVFDIFKI GIGPSSSHTV GPMKAGKQFT DDLIARNLLK DVTRVVVDVY GSLSLTGKGH
HTDIAIIMGL AGNLPDTVDI DSIPGFIQDV NTHGRLMLAN GQHEVEFPVD QCMNFHADNL
SLHENGMRIT ALAGDKVVYS QTYYSIGGGF IVDEEHFGQQ DSAPVEVPYP YSSAADLQKH
CQETGLSLSG LMMKNELALH SKEELEQHLA NVWEVMCGGI ERGISTEGVL PGKLRVPRRA
AALRRMLVSQ DKTTTDPMAV VDWINMFALA VNEENAAGGR VVTAPTNGAC GIIPAVLAYY
DKFIREVNAN SLARYLLVAS AIGSLYKMNA SISGAEVGCQ GEVGVACSMA AAGLAELLGA
SPAQVCIAAE IAMEHNLGLT CDPVAGQVQV PCIERNAIAA VKAVNAARMA LRRTSEPRVC
LDKVIETMYE TGKDMNAKYR ETSRGGLAMK IVACD
|
|---|
| |