Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_4050 |
Symbol | gudP |
ID | 6967524 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 3747545 |
End bp | 3748897 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 643387810 |
Product | glucarate permease |
Protein accession | YP_002272253 |
Protein GI | 209400750 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | [TIGR00893] d-galactonate transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTCTT TAAGTCAGGC TGCGAGCAGT GTGGAAAAAC GCACGAATGC TCGTTACTGG ATAGTGGTGA TGTTGTTTAT CGTCACATCC TTCAACTACG GCGACCGCGC TACGCTTTCT ATTGCCGGTT CGGAAATGGC CAAAGATATC GGCCTTGATC CCGTGGGAAT GGGCTATGTG TTCTCTGCCT TCTCATGGGC TTATGTTATC GGGCAGATCC CTGGTGGTTG GTTGCTGGAT CGTTTTGGTT CAAAACGCGT CTACTTCTGG TCGATCTTTA TCTGGTCGAT GTTTACCTTG CTGCAAGGCT TCGTCGATAT CTTTAGTGGA TTCGGCATTA TCGTTGCCCT GTTTACTCTG CGCTTCCTGG TCGGGCTTGC TGAAGCGCCA TCTTTCCCCG GCAACAGTCG CATTGTTGCG GCCTGGTTTC CGGCGCAGGA AAGGGGAACG GCGGTGTCGA TTTTTAACTC CGCTCAATAC TTCGCAACGG TGATCTTCGC GCCGATTATG GGCTGGCTGA CGCATGAAGT GGGCTGGTCA CACGTCTTCT TCTTTATGGG CGGTCTGGGC ATTGCCATCA GCTTTATCTG GTTGAAAGTC ATCCACGAGC CAAATCAACA TCCGGGGGTA AATCAGAAAG AGCTGGAGTA CATCGCCGCG GGTGGCGCGC TGATCAATAT GGATCAGCAA AACACCAAAG TTAAAGTGCC GTTCAGCGTG AAGTGGGGGC AGATCAAACA ACTGCTCGGG TCACGGATGA TGATCGGCGT TTATATCGGT CAGTACTGTA TCAACGCCCT GACTTACTTT TTCATTACCT GGTTTCCGGT TTATCTGGTG CAGGCGCGTG GGATGTCGAT TCTGAAAGCG GGCTTTGTGG CTTCCGTTCC GGCGGTTTGT GGTTTTATCG GTGGTGTGCT GGGTGGGATT ATTTCCGACT GGCTGATGCG CCGCACGGGA TCGCTGAACA TTGCGCGTAA AACACCGATC GTAATGGGCA TGTTGCTGTC GATGGTGATG GTGTTCTGCA ACTACGTCAA CGTTGAGTGG ATGATCATCG GCTTTATGGC GCTGGCCTTC TTCGGTAAGG GCATTGGGGC GCTGGGTTGG GCAGTAATGG CAGATACCGC GCCAAAAGAG ATCAGCGGTC TTTCCGGTGG CCTGTTCAAC ATGTTCGGTA ACATTTCTGG CATCGTCACG CCAATCGCAA TTGGTTATAT CGTTGGCACG ACTGGCTCGT TTAATGGGGC GCTGATTTAT GTTGGTGTTC ATGCCTTAAT CGCGGTACTG AGCTACCTGG TGCTGGTGGG CGATATCAAG CGTATCGAGC TGAAACCTGT CGTGGGGCAA TAA
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Protein sequence | MSSLSQAASS VEKRTNARYW IVVMLFIVTS FNYGDRATLS IAGSEMAKDI GLDPVGMGYV FSAFSWAYVI GQIPGGWLLD RFGSKRVYFW SIFIWSMFTL LQGFVDIFSG FGIIVALFTL RFLVGLAEAP SFPGNSRIVA AWFPAQERGT AVSIFNSAQY FATVIFAPIM GWLTHEVGWS HVFFFMGGLG IAISFIWLKV IHEPNQHPGV NQKELEYIAA GGALINMDQQ NTKVKVPFSV KWGQIKQLLG SRMMIGVYIG QYCINALTYF FITWFPVYLV QARGMSILKA GFVASVPAVC GFIGGVLGGI ISDWLMRRTG SLNIARKTPI VMGMLLSMVM VFCNYVNVEW MIIGFMALAF FGKGIGALGW AVMADTAPKE ISGLSGGLFN MFGNISGIVT PIAIGYIVGT TGSFNGALIY VGVHALIAVL SYLVLVGDIK RIELKPVVGQ
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