Gene ECH74115_4042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_4042 
SymbolchpA 
ID6971969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp3737552 
End bp3737887 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content47% 
IMG OID643387804 
Producttoxin ChpA 
Protein accessionYP_002272247 
Protein GI209400651 
COG category[T] Signal transduction mechanisms 
COG ID[COG2337] Growth inhibitor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000388483 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value0.446754 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAAGCC GATACGTACC CGATATGGGC GATCTGATTT GGGTTGATTT TGACCCGACA 
AAAGGTAGCG AGCAAGCCGG ACATCGTCCG GCTGTTGTCC TGAGTCCGTT CATGTACAAC
AACAAAACAG GTATGTGTCT GTGTGTTCCT TGTACAACGC AATCAAAAGG ATATCCGTTC
GAAGTTGTTT TATCCGGTCA GGAACGTGAT GGCGTAGCGT TAGCTGATCA GGTAAAAAGT
ATCGCCTGGC GGGCAAGAGG AGCAACGAAG AAAGGAACGG TTGCCCCAGA GGAATTACAA
CTCATTAAAG CCAAAATTAA CGTACTGATT GGGTAG
 
Protein sequence
MVSRYVPDMG DLIWVDFDPT KGSEQAGHRP AVVLSPFMYN NKTGMCLCVP CTTQSKGYPF 
EVVLSGQERD GVALADQVKS IAWRARGATK KGTVAPEELQ LIKAKINVLI G