Gene ECH74115_4023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_4023 
Symbol 
ID6969134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp3718711 
End bp3719286 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content47% 
IMG OID643387790 
Productglycerol-3-phosphate responsive antiterminator 
Protein accessionYP_002272233 
Protein GI209396212 
COG category[K] Transcription 
COG ID[COG1954] Glycerol-3-phosphate responsive antiterminator (mRNA-binding) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.936677 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCTCT TACACCTGCT CCGCCAGAAT CCGGTGATTG CTGCCGTTAA AGATAATGCC 
AGCCTGCAAC TGGCCATCGA TTCTGAATGC CAGTTTATTT CCGTCTTGTA CGGCAATATC
TGCACCATTA GTCAAATCGT TAAAAAGATT AAGAACGCTG GGAAATATGC TTTTATTCAT
GTTGATTTGC TGGAAGGCGC GTCAAATAAA GAAGTGGTGA TTCAGTTTTT GAAACTGGTG
ACCGAGGCGG ATGGAATTAT CAGCACCAAA GCATCGATGC TAAAAGCGGC AAGAGCGGAA
GGTTTTTTCT GTATTCATCG CCTGTTTATT GTTGATTCGA TTTCGTTTCA CAACATTGAT
AAGCAAGTTG CGCAATCGAA TCCGGATTGT ATTGAGATCC TGCCAGGCTG CATGCCCAAA
GTGCTGGGCT GGGTGACGGA AAAAATCCGC CAACCGCTGA TTGCTGGCGG GCTGGTATGC
GATGAAGAAG ATGCGCGTAA TGCGATTAAC GCGGGTGTCG TGGCGCTTTC CACCACGAAT
ACCGGAGTCT GGACGTTAGC GAAAAAATTG CTTTGA
 
Protein sequence
MPLLHLLRQN PVIAAVKDNA SLQLAIDSEC QFISVLYGNI CTISQIVKKI KNAGKYAFIH 
VDLLEGASNK EVVIQFLKLV TEADGIISTK ASMLKAARAE GFFCIHRLFI VDSISFHNID
KQVAQSNPDC IEILPGCMPK VLGWVTEKIR QPLIAGGLVC DEEDARNAIN AGVVALSTTN
TGVWTLAKKL L