Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_3998 |
Symbol | ispD |
ID | 6969179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 3696700 |
End bp | 3697410 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643387767 |
Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
Protein accession | YP_002272210 |
Protein GI | 209397849 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACCA CTCATTTGGA TGTTTGCGCC GTGGTTCCGG CGGCCGGATT TGGCCGTCGA ATGCAAACGG AATGTCCTAA GCAATATCTC TCAATCGGTA ATCAAACCAT TCTTGAACAC TCGGTGTATG CGCTGCTGGC GCATCCCCGG GTGAAACGTG TCGTCATTGC CATAAGTCCT GGCGATAGCC GTTTTGCACA ACTTCCTCTG GCGAATCATC CGCAAATCAC CGTTGTAGAT GGCGGTGATG AGCGTGCCGA TTCCGTGCTG GCAGGTTTGA AAGCCGCTGG CGACGCGCAG TGGGTATTGG TGCATGACGC CGCTCGTCCT TGTCTGCATC AGGATGACCT CGCGCGATTG TTGGCGTTGA GCGAAACCAG CCGCACGGGA GGGATCCTAG CCGCACCAGT GCGCGATACT ATGAAACGTG CCGAACCGGG CAAAAATGCC ATTGCTCATA CCGTTGATCG CAACGGCTTA TGGCACGCGC TGACGCCGCA ATTTTTCCCT CGTGAGCTGT TACATGACTG TCTGACGCGC GCTCTAAATG AAGGCGCGGC TATTACCGAC GAAGCCTCGG CGCTGGAATA TTGCGGATTC CATCCTCAGT TGGTCGAAGG CCGTGCGGAT AACATTAAAG TCACGCGCCC GGAGGATTTG GCACTGGCCG AGTTTTACCT CACCCGAACC ATCCATCAGG AGAATACATA A
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Protein sequence | MATTHLDVCA VVPAAGFGRR MQTECPKQYL SIGNQTILEH SVYALLAHPR VKRVVIAISP GDSRFAQLPL ANHPQITVVD GGDERADSVL AGLKAAGDAQ WVLVHDAARP CLHQDDLARL LALSETSRTG GILAAPVRDT MKRAEPGKNA IAHTVDRNGL WHALTPQFFP RELLHDCLTR ALNEGAAITD EASALEYCGF HPQLVEGRAD NIKVTRPEDL ALAEFYLTRT IHQENT
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