Gene ECH74115_3947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_3947 
Symbol 
ID6968281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp3652012 
End bp3652509 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content56% 
IMG OID643387720 
Productcompetence damage-inducible protein A 
Protein accessionYP_002272163 
Protein GI209396597 
COG category[R] General function prediction only 
COG ID[COG1546] Uncharacterized protein (competence- and mitomycin-induced) 
TIGRFAM ID[TIGR00199] competence/damage-inducible protein CinA C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.388392 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value0.701681 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGACA GTGAACTGAT GCAGTTAAGC GAACAGGTTG GGCAGGCGCT GAAAGCCCGT 
GGCGCAACCG TAACAACTGC TGAGTCTTGT ACCGGCGGTT GGGTAGCGAA AGTGATTACC
GATATTGCCG GCAGTTCCGC CTGGTTTGAA CGCGGATTTG TCACCTACAG TAACGAAGCC
AAAGCGCAAA TGATCGGCGT ACGCGAAGAG ACGCTGGCGC AGCATGGCGC GGTGAGTGAA
CCCGTCGTGG TGGAAATGGC GATAGGTGCA CTGAAAGCGG CTCGTGCTGA TTATGCCGTG
TCTATTAGTG GTATCGCCGG GCCGGATGGC GGCAGTGAAG AGAAGCCTGT CGGCACCGTC
TGGTTTGCTT TTGCCACTGC CCGCGGTGAA GGCATTACCC TGCGGGAATG CTTCAGCGGC
GACCGTGATG CGGTGCGTCG TCAGGCTACT GCGTATGCAT TGCAGACCTT GTGGCAACAA
TTTCTACAAA ACACTTGA
 
Protein sequence
MTDSELMQLS EQVGQALKAR GATVTTAESC TGGWVAKVIT DIAGSSAWFE RGFVTYSNEA 
KAQMIGVREE TLAQHGAVSE PVVVEMAIGA LKAARADYAV SISGIAGPDG GSEEKPVGTV
WFAFATARGE GITLRECFSG DRDAVRRQAT AYALQTLWQQ FLQNT