Gene ECH74115_3942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_3942 
SymbolcsrA 
ID6972396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp3647125 
End bp3647310 
Gene Length186 bp 
Protein Length61 aa 
Translation table11 
GC content49% 
IMG OID643387715 
Productcarbon storage regulator 
Protein accessionYP_002272158 
Protein GI209399950 
COG category[T] Signal transduction mechanisms 
COG ID[COG1551] Carbon storage regulator (could also regulate swarming and quorum sensing) 
TIGRFAM ID[TIGR00202] carbon storage regulator (csrA) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.7158e-09 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value0.528243 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATTC TGACTCGTCG AGTTGGTGAG ACCCTCATGA TTGGGGATGA GGTCACCGTG 
ACAGTTTTAG GGGTAAAGGG CAACCAGGTA CGTATTGGCG TAAATGCCCC GAAGGAAGTT
TCTGTTCACC GTGAAGAGAT CTACCAGCGT ATCCAGGCTG AAAAATCCCA GCAGTCCAGT
TACTAA
 
Protein sequence
MLILTRRVGE TLMIGDEVTV TVLGVKGNQV RIGVNAPKEV SVHREEIYQR IQAEKSQQSS 
Y