| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_3903 |
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| Symbol | gabD |
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| ID | 6971660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 3617696 |
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| End bp | 3619144 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643387677 |
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| Product | succinate-semialdehyde dehydrogenase I |
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| Protein accession | YP_002272125 |
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| Protein GI | 209399689 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 0.85959 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTGA ACGACAGTAA CTTATTCCGC CAGCAGGCGT TGATTAACGG GGAATGGCTG
GACGCCAACA ATGGTGAAGT CATCGACGTC ACCAATCCGG CGAACGGCGA CAAGCTGGGT
AGCGTGCCGA AAATGGGCGC TGATGAAACT CGCGCCGCTA TCGACGCCGC CAACCGCGCC
CTGCCCGTCT GGCGTGCGCT CACCGCCAAA GAACGCGCCA ACATTCTGCG CAACTGGTTC
AATTTGATGA TGGAGCATCA GGACGATTTA GCGCGCCTGA TGACCCTCGA ACAGGGTAAA
CCGCTGGCTG AAGCGAAAGG CGAAATCAGC TACGCCGCCT CTTTTATTGA GTGGTTTGCC
GAAGAAGGCA AACGCATTTA TGGCGACACC ATTCCCGGTC ATCAGGCCGA TAAGCGCCTG
ATTGTGATCA AGCAGCCGAT TGGCGTTACA GCGGCCATCA CGCCGTGGAA CTTTCCGGCG
GCAATGATTA CCCGCAAAGC CGGTCCGGCG CTGGCGGCAG GCTGCACCAT GGTGCTGAAG
CCCGCCAGTC AGACGCCGTT CTCTGCGCTG GCGCTGGCGG AGCTGGCGAT CCGCGCGGGC
ATTCCGGCTG GCGTGTTTAA CGTGGTCACC GGTTCGGCGG GCGCGGTGGG TAATGAACTG
ACCAGCAACC CGCTGGTACG CAAACTGTCG TTTACCGGCT CGACCGAAAT TGGCCGCCAG
TTAATGGAAC AGTGCGCGAA AGACATCAAA AAAGTGTCGC TGGAGCTGGG CGGCAACGCG
CCGTTTATCG TCTTTGACGA TGCCGATCTC GATAAAGCCG TGGAAGGCGC ACTGGCCTCG
AAATTCCGCA ACGCCGGGCA AACCTGCGTC TGCGCCAACC GTTTATACGT GCAGGACGGC
GTGTATGACC GCTTTGCCGA AAAATTGCAG CAGGCGGTGA GCAAACTGCA TATCGGCGAC
GGGCTGGATA AAGGCGTCAC CATCGGGCCG CTGATCGATG AAAAAGCGGT AGCAAAAGTG
GAAGAGCATA TTGCCGATGC GCTGGAAAAA GGCGCGCGCG TAGTTTGCGG CGGTAAAGCA
CATGAACGCG GCGGCAACTT CTTCCAGCCC ACCATTCTGG TGGACGTGCC GGCCAACGCC
AAAGTGTCGA AAGAAGAGAC CTTCGGCCCC CTCGCCCCGC TGTTCCGTTT TAAAGATGAA
GCCGATGTGA TCGCGCAAGC CAATGACACC GAGTTTGGCC TTGCCGCCTA TTTCTATGCC
CGTGATTTAA GTCGCGTCTT CCGCGTGGGC GAGGCGCTGG AGTACGGCAT CGTCGGCATC
AATACCGGGA TTATTTCCAA TGAAGTGGCC CCGTTCGGCG GCATTAAAGC CTCGGGTCTG
GGTCGTGAAG GTTCGAAGTA TGGCATCGAA GATTACTTAG AAATCAAATA TATGTGCATC
GGTCTTTAA
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| Protein sequence | MKLNDSNLFR QQALINGEWL DANNGEVIDV TNPANGDKLG SVPKMGADET RAAIDAANRA
LPVWRALTAK ERANILRNWF NLMMEHQDDL ARLMTLEQGK PLAEAKGEIS YAASFIEWFA
EEGKRIYGDT IPGHQADKRL IVIKQPIGVT AAITPWNFPA AMITRKAGPA LAAGCTMVLK
PASQTPFSAL ALAELAIRAG IPAGVFNVVT GSAGAVGNEL TSNPLVRKLS FTGSTEIGRQ
LMEQCAKDIK KVSLELGGNA PFIVFDDADL DKAVEGALAS KFRNAGQTCV CANRLYVQDG
VYDRFAEKLQ QAVSKLHIGD GLDKGVTIGP LIDEKAVAKV EEHIADALEK GARVVCGGKA
HERGGNFFQP TILVDVPANA KVSKEETFGP LAPLFRFKDE ADVIAQANDT EFGLAAYFYA
RDLSRVFRVG EALEYGIVGI NTGIISNEVA PFGGIKASGL GREGSKYGIE DYLEIKYMCI
GL
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