| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_3820 |
|---|
| Symbol | |
|---|
| ID | 6967426 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | + |
|---|
| Start bp | 3543537 |
|---|
| End bp | 3544235 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 643387605 |
|---|
| Product | DTW domain protein |
|---|
| Protein accession | YP_002272058 |
|---|
| Protein GI | 209400827 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3148] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00329477 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 63 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAAA ACGCTGTTCT CCAGTTACGC GCCGAGCGTA TTGCGCGCGC AACACGTCCT
TTTCTTGCCC GCGGTAATCG CGTTCGTCGC TGCCAACGCT GTCTTTTGCC AGAGAAATTA
TGTCTCTGTT CGACAATTAC CCCAGCACAA GCAAAAAGTC GCTTCTGTTT GCTGATGTTC
GACACCGAGC CAATGAAGCC CAGTAATACC GGGCGTCTGA TTGCTGATAT TTTGCCTGAT
ACCGTTGCGT TTCAATGGTC GCGTACCGAA CCCTCGCAGG ATTTGCTGGA TCTGGTACAA
AACCCGGATT ATCAGCCAAT GGTGGTCTTT CCCGCCTCGT ATGCTGATGA GCAACGGGAA
GTGATCTTCA CACCACCTGC CGGTAAGCCA CCGCTGTTTA TCATGCTCGA TGGTACCTGG
CCGGAAGCTC GCAAGATGTT TCGTAAAAGT CCGTATCTGG ATAATCTTCC CGTCATTTCC
GTCGATCTTT CCCGACTTTC TGCCTATCGC CTGCGTGAAG CCCAGGCTGA AGGCCAATAT
TGTACTGCCG AGGTAGCCAT CGCACTGTTA GATATGGCCG GCGATACCGG GGCGGCAGCA
GGGTTAGGCG AGCACTTCAC CCGCTTTAAA ACGCGCTATC TGGCAGGAAA AACGCAACAT
CTGGGTAGCA TCACAGCAGA ACAGTTAGAA AGCGTTTAA
|
|---|
| Protein sequence | MTENAVLQLR AERIARATRP FLARGNRVRR CQRCLLPEKL CLCSTITPAQ AKSRFCLLMF
DTEPMKPSNT GRLIADILPD TVAFQWSRTE PSQDLLDLVQ NPDYQPMVVF PASYADEQRE
VIFTPPAGKP PLFIMLDGTW PEARKMFRKS PYLDNLPVIS VDLSRLSAYR LREAQAEGQY
CTAEVAIALL DMAGDTGAAA GLGEHFTRFK TRYLAGKTQH LGSITAEQLE SV
|
|---|
| |