| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_3748 |
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| Symbol | pbpC |
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| ID | 6966771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 3470102 |
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| End bp | 3472414 |
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| Gene Length | 2313 bp |
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| Protein Length | 770 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643387540 |
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| Product | penicillin-binding protein 1C |
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| Protein accession | YP_002271993 |
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| Protein GI | 209396651 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4953] Membrane carboxypeptidase/penicillin-binding protein PbpC |
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| TIGRFAM ID | [TIGR02073] penicillin-binding protein 1C |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTCGCT TGTTAACCAA ACGCGGCTGC TGGATAACGC TGGCAGCTGC GCCATTTCTC
CTTTTTCTTG CAGCGTGGGG AGCAGATAAA CTCTGGCCTC TACCGCTGCA TGAAGTCAAT
CCCGCACGAG TGGTCGTGGC GCAGGATGGT ACGCCGCTCT GGCGCTTCGC CGATGCTGAC
GGCATCTGGC GTTATCCTGT AACAATCGAA GATGTTTCTC CACGTTACCT TGAAGCGCTG
ATCAATTATG AAGATCGCTG GTTCTGGAAG CATCCTGGGG TGAATCCATT CTCGGTGGCG
CGCGCAGCAT GGCAAGATCT CACTTCGGGA CGGGTTATTT CCGGTGGCAG CACGCTCACT
ATGCAGGTTG CTCGTCTGCT TGATCCTCAC CCCAAAACAT TTGGCGGCAA AATTCGCCAG
CTCTGGCGCG CGTTGCAACT GGAATGGCAT CTGTCTAAGC GTGAAATTCT GACCTTGTAT
CTTAACCGCG CTCCGTTTGG CGGTACGTTG CAGGGGATCG GTGCGGCAAG TTGGGCTTAT
CTCGGAAAGT CGCCTGCGAA TTTAAGCTAT TCCGAGGCGG CAATGCTGGC GGTTTTGCCG
CAAGCGCCCA GCCGTCTTCG CCCGGATCGT TGGCCGGAGC GTGCCGAAGT CGCGCGTAAT
AAAGTGCTCG AACGGATGGC CGTGCAAGGT GTGTGGTCCC GTGAGCAGGT AAAAGAGTCA
AGGGAAGAAC CCATCTGGCT GGCACCCCGA CAAATGCCGC AACTGGCACC GCTGTTTTCG
CGCATGATGC TCGGTAAAAG CAAAAGCGAC AAAATCGTTA CTACGCTGGA TGCCGGTCTT
CAACGACGTC TGGAAGAACT GGCGCAAAAC TGGAAAGGAC GATTACCACC GCGCAGCTCA
CTGGCGATGA TCGTGGTTGA TCATACCGAT ATGCGTGTTC GCGGCTGGGT GGGTTCGGTT
GATCTCAACG ATGATTCACG CTTTGGTCAT GTTGATATGG TCAATGCGAT CCGATCGCCA
GGATCGGTGC TCAAACCGTT TGTTTACGGT CTGGCGCTGG ATGAAGGATT GATCCACCCG
GCATCACTGC TGCAAGACGT CCCCCGGCGT ACCGGTGATT ACCGACCTGG CAACTTTGAC
AGCGGTTTTC ATGGCCCGAT CAGCATGAGC GAGGCGCTGG TGCGCTCGCT GAATTTACCT
GCTGTGCAGG TGCTGGAAGC CTATGGACCG AAACGGTTTG CGGCAAAGTT ACGCAATGTT
GGATTGCCGT TATATTTGCC CAACGGTGCT GCGCCGAATC TTTCGCTCAT TCTCGGCGGC
GCTGGTGCGA AACTGGAAGA TATGGCGGCA GCGTATACCG CGTTTGCTCG CCACGGCAAG
GCAGGCAAAT TGCGCTTACA GCCTGACGAT CCGCTGCTTG AACGGCCTTT AATGTCGTCG
GGAGCGGCGT GGATCATTCG CCGGATTATG GCTGATGAAG CGCTACCCTT GCCGGATGGT
GCCTTGCCGC GCGTCGCCCC ACTGGCATGG AAAACGGGCA CCAGCTATGG CTATCGTGAC
GCCTGGGCGA TTGGGGTTAA CGCTCGCTAT GTCATTGGGA TCTGGACTGG CAGACCGGAC
GGCACGCCCG TTGTTGGTCA GTTTGGTTTT GCCAGCGCCG TACCATTGTT GAATCAGGTC
AATAATATCT TACTGTCGCG CAGTGCTAAT CTGCCGGAAG ACCCGCGCCC GAACTCAGTC
ACTCGTGGCG TTATTTGCTG GCCGGGCGGA CAGTCTTTGC CGGAAGGTGA CGGTAACTGT
CGCCGCCGCC TGGCAACCTG GCTGCTGGAC GGGAGTCAGC CGCCAACTCT ATTACTGCCG
GAGCAGGAAG GCATTAATGG CATTCGTTTC CCCATCTGGC TGGATGAAAA TGGCAAACGT
GTTGCCGCTG ATTGCCCGCA AGCGCGACAA GAAATGATAA ATGTCTGGCC GCTACCGCTG
GAACCCTGGT TGCCCGCATC AGAACGTCGC GCTGTGCGCT TACCACCGGC CTCGACAATT
TGCCCGCCAT ACGGTCACGA TGCCCAGCTC CCGCTGCAGC TGACAGGCGT TCGCGATGGC
GAGATTATTA AACGTTTACC GGGCGCAGCG GAAGCGACTT TGCCGTTGCA ATCAAGTGGA
GGGGCAGGTG AACGCTGGTG GTTTCTGAAT GGCGAACCGT TAACTGAACG CGGGCGCAAC
GTGACCCTGC ATTTGACGGA TAAAGGTGAT TATCAATTGC TGGTGATGGA TGACGTAGGG
CAAATCGCGT CAGTACATTT TTCATTTCAG TGA
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| Protein sequence | MPRLLTKRGC WITLAAAPFL LFLAAWGADK LWPLPLHEVN PARVVVAQDG TPLWRFADAD
GIWRYPVTIE DVSPRYLEAL INYEDRWFWK HPGVNPFSVA RAAWQDLTSG RVISGGSTLT
MQVARLLDPH PKTFGGKIRQ LWRALQLEWH LSKREILTLY LNRAPFGGTL QGIGAASWAY
LGKSPANLSY SEAAMLAVLP QAPSRLRPDR WPERAEVARN KVLERMAVQG VWSREQVKES
REEPIWLAPR QMPQLAPLFS RMMLGKSKSD KIVTTLDAGL QRRLEELAQN WKGRLPPRSS
LAMIVVDHTD MRVRGWVGSV DLNDDSRFGH VDMVNAIRSP GSVLKPFVYG LALDEGLIHP
ASLLQDVPRR TGDYRPGNFD SGFHGPISMS EALVRSLNLP AVQVLEAYGP KRFAAKLRNV
GLPLYLPNGA APNLSLILGG AGAKLEDMAA AYTAFARHGK AGKLRLQPDD PLLERPLMSS
GAAWIIRRIM ADEALPLPDG ALPRVAPLAW KTGTSYGYRD AWAIGVNARY VIGIWTGRPD
GTPVVGQFGF ASAVPLLNQV NNILLSRSAN LPEDPRPNSV TRGVICWPGG QSLPEGDGNC
RRRLATWLLD GSQPPTLLLP EQEGINGIRF PIWLDENGKR VAADCPQARQ EMINVWPLPL
EPWLPASERR AVRLPPASTI CPPYGHDAQL PLQLTGVRDG EIIKRLPGAA EATLPLQSSG
GAGERWWFLN GEPLTERGRN VTLHLTDKGD YQLLVMDDVG QIASVHFSFQ
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