| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_3465 |
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| Symbol | mnmC |
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| ID | 6970260 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 3209579 |
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| End bp | 3211585 |
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| Gene Length | 2007 bp |
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| Protein Length | 668 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 643387271 |
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| Product | 5-methylaminomethyl-2-thiouridine methyltransferase |
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| Protein accession | YP_002271734 |
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| Protein GI | 209398413 |
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| COG category | [E] Amino acid transport and metabolism
[S] Function unknown |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating)
[COG4121] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR03197] tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAACACT ACTCCATACA ACCTGCCAAC CTCGAATTTA ATGCTGAGGG TACACCTGTT
TCCCGAGATT TTGACGATGT CTATTTTTCC AACGATAACG GGCTGGAAGA GACGCGTTAT
GTTTTTCTGG GAGGTAACCA ATTAGAGGCA CGCTTTCCTG AACATCCACA TCCTCTGTTT
GTGGTAGCAG AGAGCGGCTT CGGCACCGGA TTAAACTTCC TGACGCTATG GCAGGCATTT
GATCAGTTTC GCGAAGCGCA TCCGCAAGCG CAATTACAAC GCTTACATTT CATTAGTTTT
GAGAAATTTC CCCTCACCCG TGCGGATTTA GCCTTAGCGC ATCAACACTG GCCGGAACTG
GCTCCGTGGG CAGAACAACT TCAGGCGCAG TGGCCAATGC CCTTGCCCGG TTGCCATCGT
TTATTACTTG ATGAAGGCCG CGTGACGCTG GATTTATGGT TTGGCGATAT TAATGAACTG
ATCAGCCAAC TGGACGATTC TCTAAATCAA AAAGTAGATG CCTGGTTTCT GGACGGCTTT
GCGCCAGCGA AAAACCCGGA TATGTGGACG CAAAATCTGT TTAACGCCAT GGCAAGGTTG
GCGCGTCCAG GCGGCACGCT GGCGACATTT ACGTCTGCCG GTTTTGTCCG CCGCGGTTTG
CAGGAAGCCG GATTCACGAT GCAAAAACGT AAGGGCTTTG GACGCAAACG GGAAATGCTT
TGTGGGGTGA TGGAACAGAC ATTACCACTC CCCTGCTCCA CGCCGTGGTT TAATCGTACG
GGCAGCAGCA AACGGGAAGT AGCGATTATC GGCGGTGGTA TTGCCAGCGC ATTGTTGTCG
CTGGCGCTAT TGCGTCGCGG CTGGCAAGTA ACGCTTTATT GCGCGGATGA AGCCCCCGCG
CTGGGTGCTT CCGGCAATCG CCAGGGGGCG TTGTATCCGT TATTAAGCAA ACACGATGAG
GCGCTAAACC GCTTTTTCTC TAATGGGTTT ACTTTTGCTC GTCGACTTTA TGATTCATTA
CCCGTTAAAT TTGATCATGA CTGGTGCGGC GTCACGCAGT TAGGCTGGGA TGAGAAAAGC
CAGCATAAAA TCGCACAGAT GTTGTCAATG GATTTACCCG AAGAACTGGC TGTAGCCGTT
GAGGCAAATG CGGTTGAACA AATTACGGGC GTTACGACAA ATTGCAGCGG TATTACTTAT
CCGCAAGGTG GCTGGCTGTG TCCGGCAGAA CTGACCCGTA ATGTGCTGGA ACTGGCGCAA
CAGCAGGGTT TGCAGATTTA TTATCAATAT CAGTTACAGG ATTTATCCCG TAAGGATGAC
TGTTGGTTGT TGACGTTTGC AGGAGATCAG CAAGCGACAC ACAGTGTAGT GGTACTGGCG
AACGGGCATC AAATCAGCCG TTTCAGCCAA ACATCGTCTC TGCCAGTGTA TTCGGTTGCC
GGTCAGGTCA GCCATATTCC GACGACACCC GAACTGGCAA AACTGAAACA GGTGCTGTGC
TATGACGGTT ATCTCACGCC GCAAAATCCG GCGAATCAGC ACCATTGTAT TGGTGCCAGT
TATCATCGCG GCAGCGAAGA GACGGCGTAC AGTGAAGACA ATCAGCAGCA GAATCGCCAG
CGATTGATTG ATTGTTTCCC ACACGCACAA TGGGCGAAGA CGGTTGATGT CAGTAAAAAA
GAGGCGCGCT GCGGTGTGCG TTGTGCCACC CGCGATCATC TGCCAATGGT AGGTAATGTT
CCCGATTATG AGGCAACACT CGTGGAATAT GCGTCGCTGG CGGAGCAGAA AGATAAGGCG
GTAAGCGCGC CGGTTTTTGA CGATCTCTTT ATGTTTGCTG CTTTAGGTTC GCGCGGTTTG
TGTTCTGCCC CGCTGTGTGC CGAGATTCTG GCGGCGCAGA TGAGCGACGA ACCGATTCCG
ATGGATGCCA GTACGCTGGC GGCGTTAAAT CCGAATCGGT TATGGGTGCG GAAATTGTTG
AAAGGTAAAG CGGTTAAGGC CGGGTAA
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| Protein sequence | MKHYSIQPAN LEFNAEGTPV SRDFDDVYFS NDNGLEETRY VFLGGNQLEA RFPEHPHPLF
VVAESGFGTG LNFLTLWQAF DQFREAHPQA QLQRLHFISF EKFPLTRADL ALAHQHWPEL
APWAEQLQAQ WPMPLPGCHR LLLDEGRVTL DLWFGDINEL ISQLDDSLNQ KVDAWFLDGF
APAKNPDMWT QNLFNAMARL ARPGGTLATF TSAGFVRRGL QEAGFTMQKR KGFGRKREML
CGVMEQTLPL PCSTPWFNRT GSSKREVAII GGGIASALLS LALLRRGWQV TLYCADEAPA
LGASGNRQGA LYPLLSKHDE ALNRFFSNGF TFARRLYDSL PVKFDHDWCG VTQLGWDEKS
QHKIAQMLSM DLPEELAVAV EANAVEQITG VTTNCSGITY PQGGWLCPAE LTRNVLELAQ
QQGLQIYYQY QLQDLSRKDD CWLLTFAGDQ QATHSVVVLA NGHQISRFSQ TSSLPVYSVA
GQVSHIPTTP ELAKLKQVLC YDGYLTPQNP ANQHHCIGAS YHRGSEETAY SEDNQQQNRQ
RLIDCFPHAQ WAKTVDVSKK EARCGVRCAT RDHLPMVGNV PDYEATLVEY ASLAEQKDKA
VSAPVFDDLF MFAALGSRGL CSAPLCAEIL AAQMSDEPIP MDASTLAALN PNRLWVRKLL
KGKAVKAG
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