Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_3357 |
Symbol | rcsB |
ID | 6971627 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 3090526 |
End bp | 3091176 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 643387168 |
Product | transcriptional regulator RcsB |
Protein accession | YP_002271631 |
Protein GI | 209399700 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000561339 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 71 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAATA TGAACGTAAT TATTGCCGAT GACCATCCGA TAGTCTTGTT CGGTATTCGC AAATCACTTG AGCAAATTGA GTGGGTGAAT GTTGTCGGCG AATTTGAAGA CTCTACAGCA CTGATCAACA ACCTGCCGAA ACTGGATGCG CATGTGTTGA TTACCGATCT CTCCATGCCT GGCGATAAGT ACGGCGATGG CATTACCTTA ATTAAGTACA TCAAGCGCCA TTTCCCAAGC CTGTCGATTA TTGTTCTGAC CATGAACAAC AACCCGGCGA TTCTTAGTGC GGTATTGGAT CTGGATATCG AAGGGATCGT GCTGAAACAA GGTGCACCGA CCGATCTGCC GAAAGCCCTC GCAGCGCTGC AAAAAGGAAA GAAATTTACC CCGGAAAGCG TTTCTCGCCT GTTGGAAAAA ATCAGTGCTG GAGGTTACGG TGACAAACGT CTCTCGCCAA AAGAGAGTGA AGTTCTGCGC CTGTTTGCGG AAGGCTTCCT GGTGACCGAG ATCGCTAAAA AGCTGAACCG CAGTATTAAA ACCATCAGTA GCCAGAAGAA ATCTGCGATG ATGAAGCTGG GTGTCGAGAA CGATATCGCC CTGCTGAATT ATCTCTCTTC AGTAACGTTA AGTCCGGCAG ATAAAGACTA A
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Protein sequence | MNNMNVIIAD DHPIVLFGIR KSLEQIEWVN VVGEFEDSTA LINNLPKLDA HVLITDLSMP GDKYGDGITL IKYIKRHFPS LSIIVLTMNN NPAILSAVLD LDIEGIVLKQ GAPTDLPKAL AALQKGKKFT PESVSRLLEK ISAGGYGDKR LSPKESEVLR LFAEGFLVTE IAKKLNRSIK TISSQKKSAM MKLGVENDIA LLNYLSSVTL SPADKD
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