| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_3353 |
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| Symbol | ompC |
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| ID | 6970891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 3085995 |
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| End bp | 3087098 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 643387165 |
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| Product | outer membrane porin protein C |
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| Protein accession | YP_002271628 |
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| Protein GI | 209400412 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.128498 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 76 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAGTTA AAGTACTGTC CCTCCTGGTC CCAGCTCTGC TGGTAGCAGG CGCAGCAAAC
GCTGCTGAAG TTTACAACAA AGACGGCAAC AAATTAGATC TGTACGGTAA AGTAGACGGC
CTGCACTATT TCTCTGACGA CAAGTCTGTA GATGGCGACC AGACCTACAT GCGTCTTGGC
TTCAAAGGTG AAACTCAGGT TACTGACCAG CTGACCGGTT ACGGCCAGTG GGAATATCAG
ATCCAGGGCA ACAGCGCTGA AAACGAAAAC AACTCCTGGA CCCGTGTGGC ATTCGCAGGT
CTGAAATTCC AGGATGTAGG TTCTTTCGAC TACGGTCGTA ACTACGGCGT AGTTTACGAC
GTAACTTCCT GGACCGACGT TCTGCCAGAA TTCGGTGGTG ACACCTACGG TTCTGACAAC
TTCATGCAGC AGCGTGGTAA CGGTTTCGCG ACCTACCGTA ACACTGACTT CTTCGGTCTG
GTTGACGGCC TGAACTTTGC TGTTCAGTAC CAGGGCAAAA ACGGTAGCGT AAGCGGCGAA
GGCATGACTA ACAACGGTCG TGAAGCACTG CGTCAGAACG GCGACGGCGT TGGCGGATCT
ATCACTTATG ATTACGAAGG CTTCGGTATC GGTGCTGCAG TTTCCAGCTC CAAACGTACT
GATGATCAGA ACAGCCCGCT GTACATCGGT AACGGCGACC GTGCTGAAAC CTACACTGGT
GGTCTGAAAT ACGACGCTAA CAACATCTAT CTGGCTGCTC AGTACACCCA GACCTACAAC
GCAACTCGCG TAGGTTCCCT GGGTTGGGCG AACAAAGCAC AGAACTTCGA AGCTGTTGCT
CAGTACCAGT TCGACTTCGG TCTGCGTCCG TCCCTGGCTT ACCTGCAGTC TAAAGGTAAA
AACCTGGGTG TCATCAATGG TCGTAACTAC GACGACGAAG ATATCCTGAA ATATGTTGAT
GTTGGCGCGA CCTACTACTT CAACAAAAAC ATGTCCACCT ATGTTGACTA CAAAATCAAC
CTGCTGGACG ACAACCAGTT CACTCGTGAC GCTGGCATCA ACACTGATAA CATCGTAGCT
CTGGGTCTGG TTTACCAGTT CTAA
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| Protein sequence | MKVKVLSLLV PALLVAGAAN AAEVYNKDGN KLDLYGKVDG LHYFSDDKSV DGDQTYMRLG
FKGETQVTDQ LTGYGQWEYQ IQGNSAENEN NSWTRVAFAG LKFQDVGSFD YGRNYGVVYD
VTSWTDVLPE FGGDTYGSDN FMQQRGNGFA TYRNTDFFGL VDGLNFAVQY QGKNGSVSGE
GMTNNGREAL RQNGDGVGGS ITYDYEGFGI GAAVSSSKRT DDQNSPLYIG NGDRAETYTG
GLKYDANNIY LAAQYTQTYN ATRVGSLGWA NKAQNFEAVA QYQFDFGLRP SLAYLQSKGK
NLGVINGRNY DDEDILKYVD VGATYYFNKN MSTYVDYKIN LLDDNQFTRD AGINTDNIVA
LGLVYQF
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