| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_3293 |
|---|
| Symbol | |
|---|
| ID | 6969003 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | - |
|---|
| Start bp | 3025078 |
|---|
| End bp | 3025959 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643387105 |
|---|
| Product | putative DNA-binding transcriptional regulator |
|---|
| Protein accession | YP_002271569 |
|---|
| Protein GI | 209399117 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.020887 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 0.438576 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACATCA CCCTCCGGCA GTTGGAAGTT TTTGCAGAAG TATTGAAAAG TGGATCAACC
ACCCAAGCGT CGGTGATGCT GGCGTTGTCG CAATCAGCAG TGAGCGCAGC CTTGACCGAC
CTGGAAGGGC AGCTTGGCGT GCAACTGTTT GATCGCGTGG GGAAAAGACT GGTTGTTAAT
GAACACGGGC GGCTGCTCTA TCCGCGTGCG TTGGCATTGC TTGAACAGGC GGTTGAAATC
GAACAACTGT TTCGCGAAGA CAACGGCGCG ATTCGTATCT ATGCCAGTAG TACCATCGGT
AACTACATTC TGCCTGCAGT TATCGCCCGT TATCGCCATG ATTATCCGCA GTTGCCGATT
GAACTTAGCG TTGGGAATAG CCAGGACGTG ATGCAAGCGG TGCTGGATTT CCGCGTTGAT
ATTGGCTTTA TTGAAGGACC GTGCCACAGC ACTGAAATCA TTTCTGAACC GTGGCTGGAA
GACGAGCTGG TGGTTTTCGC CGCGCCGACT TCGCCGTTGG CCCGTGGTCC GGTCACCTTA
GAACAGCTGG CCGCTGCGCC GTGGATCCTG CGTGAACGCG GTTCCGGCAC GCGGGAGATT
GTCGATTATC TGTTGCTGTC ACATTTACCG AAGTTTGAGA TGGCGATGGA ATTAGGTAAC
TCCGAGGCAA TCAAACATGC GGTGCGTCAT GGGTTGGGAA TTAGTTGCCT GTCGCGACGT
GTGATTGAAG ATCAATTGCA GGCAGGCACA TTAAGTGAAG TTGCGGTCCC TCTGCCGCGC
CTGATGCGTA CGTTGTGGCG TATACATCAT CGGCAAAAAC ACCTTTCCAA CGCGCTACGG
CGCTTTCTGG ACTATTGCGA TCCCGCAAAT GTGCCGCGTT AA
|
|---|
| Protein sequence | MHITLRQLEV FAEVLKSGST TQASVMLALS QSAVSAALTD LEGQLGVQLF DRVGKRLVVN
EHGRLLYPRA LALLEQAVEI EQLFREDNGA IRIYASSTIG NYILPAVIAR YRHDYPQLPI
ELSVGNSQDV MQAVLDFRVD IGFIEGPCHS TEIISEPWLE DELVVFAAPT SPLARGPVTL
EQLAAAPWIL RERGSGTREI VDYLLLSHLP KFEMAMELGN SEAIKHAVRH GLGISCLSRR
VIEDQLQAGT LSEVAVPLPR LMRTLWRIHH RQKHLSNALR RFLDYCDPAN VPR
|
|---|
| |