| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_3260 |
|---|
| Symbol | pbpG |
|---|
| ID | 6971524 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | - |
|---|
| Start bp | 2994214 |
|---|
| End bp | 2995155 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 643387073 |
|---|
| Product | D-alanyl-D-alanine endopeptidase |
|---|
| Protein accession | YP_002271537 |
|---|
| Protein GI | 209396832 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 0.00935294 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCTCATCA TGCCGAAATT TCGAGTTTCT TTATTTAGCC TGGCCCTGAT GCTGGCTGTG
CCTTTGGCAC CGCAGGCCGT TGCGAAAACG GCAGCCGCTA CCACCGCTTC ACAACCGGAA
ATTGCCTCCG GTAGCGCGAT GATTGTTGAT CTGAATACCA ACAAAGTGAT CTATTCGAAC
CACCCGGATC TGGTGCGTCC GATTGCGTCT ATCAGCAAAT TAATGACTGC GATGGTCGTG
CTGGATGCAC GACTGCCGCT GGATGAAAAA CTAAAAGTGG ATATCAGCCA GACGCCGGAG
ATGAAAGGGG TCTATTCGCG CGTACGACTG AATAGCGAAA TCAGCCGTAA AGATATGCTG
TTGCTGGCGC TGATGTCTTC AGAAAACCGC GCGGCGGCAA GCCTTGCGCA CCATTATCCC
GGTGGTTACA AAGCCTTTAT TAAGGCAATG AATGCGAAAG CGAAATCGCT CGGAATGAAC
AACACGCGCT TTGTTGAACC TACCGGATTG TCGGTGCATA ACGTTTCAAC CGCCCGTGAC
TTAACCAAAC TGCTCATTGC CAGCAAACAA TATCCGTTGA TCGGGCAGTT AAGTACTACC
CGGGAAGATA TGGCAACCTT CTCTAACCCG ACGTATACGC TGCCGTTCCG CAATACTAAT
CATCTGGTGT ATCGCGATAA CTGGAATATC CAGCTAACCA AAACCGGCTT TACCAATGCG
GCGGGCCATT GTCTGGTGAT GCGTACGGTT ATCAATAATA AACCGGTGGC GCTGGTAGTG
ATGGATGCGT TTGGCAAATA CACCCATTTT GCCGATGCCA GCCGCCTGCG TACCTGGATT
GAAACCGGTA AAGTGATGCC TGTTCCGGCA GCAGCGTTAA GCTATAAAAA ACAAAAAGCC
GCCCAAATGG CGGCGGCGGG GCAGACGGCA CAGAACGATT AA
|
|---|
| Protein sequence | MLIMPKFRVS LFSLALMLAV PLAPQAVAKT AAATTASQPE IASGSAMIVD LNTNKVIYSN
HPDLVRPIAS ISKLMTAMVV LDARLPLDEK LKVDISQTPE MKGVYSRVRL NSEISRKDML
LLALMSSENR AAASLAHHYP GGYKAFIKAM NAKAKSLGMN NTRFVEPTGL SVHNVSTARD
LTKLLIASKQ YPLIGQLSTT REDMATFSNP TYTLPFRNTN HLVYRDNWNI QLTKTGFTNA
AGHCLVMRTV INNKPVALVV MDAFGKYTHF ADASRLRTWI ETGKVMPVPA AALSYKKQKA
AQMAAAGQTA QND
|
|---|
| |