| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_3234 |
|---|
| Symbol | |
|---|
| ID | 6971037 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | - |
|---|
| Start bp | 2973250 |
|---|
| End bp | 2974254 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 643387050 |
|---|
| Product | phage replication protein O |
|---|
| Protein accession | YP_002271514 |
|---|
| Protein GI | 209400638 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01610] phage replication protein O, N-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.69672 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.00032454 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAAAG CCGGTCTGCT GGAACAGAAC CGACTTTCAG GTGCAAATCG TAACGCACTC
ATTGCGGGAG GAATTATGGC AAACACTGCT GAGATATTCA ATTTTCCAGT GCCGGATGTG
GCACAAAAGG AGCCGCGCGT GGCAGATCTC GATGATGGTT ATACGCGCAT TGCAAATGAG
TTGCTGGAAG CTGTGATGCT GGCCGGATTA ACACAGCACC AGCTTCTGGT CTTCCTGGCT
GTCATGCGCA AAACATATGG CTTTAATAAA AAACTGGATT GGGTGAGCAA CGAGCAACTT
TCCGAATTGA CCGGGATATT GCCGCACAAG TGTTCTGCTG CAAAAAGCGT TCTGGTAAAG
CGTGGGATTC TTATTCAGAG CGGGCGGAAT ACCGGCATTA ATAATGTGGT CAGTGAATGG
TCAACATTAC CCGAATCAGG TAAGAAAAAT AAAGTTTACC TGAAAGAGGT AAATTTACCT
GAATCAGGTA AAAAAAGTTT ACCCAAATCA GGTAAAGACG TTTACCCGAA TCAGGTAAAC
ACAAAAGACA AAATAACAAA AGACAATATA AAACCTTATT CGTCCGAGAA TTCTGGCGAA
TCCTCTGACC AGCCAGAAAA CGACCTTCCT GTGGTGAAAC CGGATGCTGC GATTCAGAGC
GGCAGCAAGT GGGGGACAGC AGAAGACCTG ACCGCCGCAG AGTGGATGTT TGACATGGTG
AAGACCATCG CGCCATCAGC CAGAAAACCG AATTTTGCAG GGTGGGCTAA CGATATCCGC
CTGATGCGTG AACGTGACGG ACGTAACCAC CGCGACATGT GCGTGCTGTT CCGCTGGGCA
TGCCAGGACA ACTTCTGGTC CGGTAACGTG CTAAGTCCGG CCAAACTCCG TGACAAGTGG
ACCCAACTCG AAATCAACCG TAACAAGCAA CAGGCTGGAG TGACAGCCGG AAAATCAAAA
CTGGACCTGA CAAACACTGA CTGGATTTAT GGGGTGGATT TATGA
|
|---|
| Protein sequence | MAKAGLLEQN RLSGANRNAL IAGGIMANTA EIFNFPVPDV AQKEPRVADL DDGYTRIANE
LLEAVMLAGL TQHQLLVFLA VMRKTYGFNK KLDWVSNEQL SELTGILPHK CSAAKSVLVK
RGILIQSGRN TGINNVVSEW STLPESGKKN KVYLKEVNLP ESGKKSLPKS GKDVYPNQVN
TKDKITKDNI KPYSSENSGE SSDQPENDLP VVKPDAAIQS GSKWGTAEDL TAAEWMFDMV
KTIAPSARKP NFAGWANDIR LMRERDGRNH RDMCVLFRWA CQDNFWSGNV LSPAKLRDKW
TQLEINRNKQ QAGVTAGKSK LDLTNTDWIY GVDL
|
|---|
| |