| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_3071 |
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| Symbol | gatC |
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| ID | 6966799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 2843259 |
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| End bp | 2844614 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 643386903 |
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| Product | PTS system, galactitol-specific IIC component |
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| Protein accession | YP_002271371 |
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| Protein GI | 209397449 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3775] Phosphotransferase system, galactitol-specific IIC component |
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| TIGRFAM ID | [TIGR00827] PTS system, galactitol-specific IIC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0000414376 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTTTTCAG AAGTCATGCG TTATATTCTC GATCTCGGCC CTACGGTGAT GTTGCCGATT
GTCATCATTA TTTTTTCTAA AATTTTAGGC ATGAAGGCAG GCGATTGCTT TAAAGCGGGT
CTGCATATCG GGATTGGCTT TGTTGGCATT GGCCTTGTGA TTGGCTTAAT GCTGGATTCC
ATTGGCCCGG CGGCGAAAGC GATGGCGGAA AATTTCGACC TGAATCTGCA TGTGGTCGAT
GTCGGCTGGC CGGGCTCTTC ACCAATGACC TGGGCGTCGC AAATTGCGCT GGTGGCGATT
CCGATTGCGA TTCTGGTTAA CGTGGCGATG TTACTGACCC GTATGACGCG GGTGGTAAAT
GTTGATATCT GGAATATCTG GCATATGACC TTCACCGGCG CGTTGCTGCA TCTGGCAACC
GGTTCATGGA TGATAGGGAT GGCAGGTGTG GTAATTCACG CGGCGTTTGT TTATAAGCTC
GGCGACTGGT TTGCCCGCGA TACCCGAAAT TTCTTTGAGC TGGAAGGCAT TGCTATTCCG
CACGGTACGT CGGCGTATAT GGGGCCGATT GCGGTGCTGG TCGATGCTAT CATCGAGAAA
ATCCCAGGCG TTAACCGTAT TAAATTTAGC GCCGACGATA TTCAGCGCAA ATTTGGCCCG
TTTGGCGAGC CTGTCACCGT GGGTTTTGTG ATGGGGCTGA TTATCGGCAT CCTCGCGGGT
TACGATGTCA AAGGTGTATT GCAGCTGGCG GTAAAAACGG CGGCGGTGAT GCTGCTAATG
CCACGGGTGA TTAAACCCAT CATGGATGGT TTAACGCCCA TCGCTAAGCA GGCCCGTAGT
CGTTTACAGG CGAAGTTCGG CGGTCAGGAG TTCCTGATTG GCCTGGATCC CGCATTACTG
CTGGGGCATA CGGCGGTGGT ATCGGCAAGC CTGATTTTTA TTCCGCTCAC CATTTTAATT
GCTGTTTGTG TTCCTGGTAA TCAGGTACTG CCGTTTGGCG ATCTTGCCAC TATCGGCTTC
TTCGTGGCGA TGGCGGTCGC GGTGCATCGT GGAAATCTGT TCCGCACCTT AATCTCGGGT
GTCATCATTA TGAGCATCAC CCTGTGGATC GCGACGCAAA CTATTGGTTT GCACACCCAA
CTGGCGGCTA ATGCTGGGGC GTTAAAAGCC GGGGGTATGG TGGCTTCAAT GGATCAGGGC
GGTTCTCCCA TTACCTGGTT ACTGATTCAG GTTTTCTCCC CGCAAAATAT TCCCGGTTTC
ATTATTATCG GCGCAATTTA TCTTACCGGT ATTTTCATGA CCTGGCGTAG AGCGCGTGGC
TTTATTAAAC AAGAGAAAGT CGTTCTCGCA GAATAA
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| Protein sequence | MFSEVMRYIL DLGPTVMLPI VIIIFSKILG MKAGDCFKAG LHIGIGFVGI GLVIGLMLDS
IGPAAKAMAE NFDLNLHVVD VGWPGSSPMT WASQIALVAI PIAILVNVAM LLTRMTRVVN
VDIWNIWHMT FTGALLHLAT GSWMIGMAGV VIHAAFVYKL GDWFARDTRN FFELEGIAIP
HGTSAYMGPI AVLVDAIIEK IPGVNRIKFS ADDIQRKFGP FGEPVTVGFV MGLIIGILAG
YDVKGVLQLA VKTAAVMLLM PRVIKPIMDG LTPIAKQARS RLQAKFGGQE FLIGLDPALL
LGHTAVVSAS LIFIPLTILI AVCVPGNQVL PFGDLATIGF FVAMAVAVHR GNLFRTLISG
VIIMSITLWI ATQTIGLHTQ LAANAGALKA GGMVASMDQG GSPITWLLIQ VFSPQNIPGF
IIIGAIYLTG IFMTWRRARG FIKQEKVVLA E
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