Gene ECH74115_2829 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_2829 
Symbol 
ID6972388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp2635299 
End bp2636753 
Gene Length1455 bp 
Protein Length484 aa 
Translation table11 
GC content50% 
IMG OID643386679 
Producthypothetical protein 
Protein accessionYP_002271152 
Protein GI209399760 
COG category[V] Defense mechanisms 
COG ID[COG0534] Na+-driven multidrug efflux pump 
TIGRFAM ID[TIGR00797] putative efflux protein, MATE family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.99298e-08 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value0.437543 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAATATCT CCTCTGCTTT ACGCCAGGTT GTTCACGGCA CTCGCTGGCA CGCTAAACGC 
AAGAGCTACA AAGTGTTGTT CTGGCGCGAG ATAACCCCGT TTGCTGTTCC TATCTTCATG
GAGAATGCCT GTGTCCTGTT GATGGGGGTT CTGAGCACTT TTCTGGTCAG CTGGCTGGGA
AAAGATGCGA TGGCCGGCGT GGGATTGGCG GACAGCTTCA ATATGGTCAT TATGGCTTTT
TTTGCTGCTA TCGATCTTGG TACTACTGTC GTTGTGGCAT TTAGTCTCGG TAAGCGGGAT
CGACGACGAG CGAGGGTGGC GACGCGGCAG TCATTGGTGA TCATGACGTT GTTTGCCGTA
CTGTTGGCAA CGCTTATTCA TCATTTTGGC GAGCAAATTA TTGATTTCGT CGCGGGTGAT
GCCACGACAG AAGTTAAAGC ACTGGCGTTG ACTTATCTGG AGCTGACGGT ACTCAGTTAT
CCAGCAGCTG CCATCACTCT AATTGGTAGC GGGGCACTTC GTGGTGCAGG GAATACGAAA
ATACCGCTAC TGATTAACGG TAGCCTGAAT ATTCTTAATA TTATTATTAG CGGCATATTG
ATTTACGGCC TTTTCTCCTG GCCGGGACTG GGATTTGTCG GGGCTGGGTT GGGTTTAACC
ATTTCTCGTT ATATTGGCGC AGTTGCAATT TTGTGGGTGC TGGCGATTGG TTTTAATCCT
GCGCTAAGGA TTTCGTTAAA GAGCTATTTT AAACCGCTGA ATTTTAGCAT TATCTGGGAA
GTCATGGGGA TTGGTATTCC AGCGAGTGTC GAATCAGTGT TATTTACCAG TGGTCGGTTA
TTAACCCAAA TGTTCGTTGC CGGAATGGGG ACCAGTGTTA TTGCCGGAAA TTTTATCGCG
TTTTCAATTG CGGCTCTTAT CAACTTACCC GGAAGTGCGC TCGGTTCTGC TTCTACGATC
ATTACAGGCC GAAGGTTGGG GGTAGGGCAG ATAGCGCAAG CAGAGATTCA GTTGCGGCAT
GTGTTTTGGC TGACCACTCT TGGATTAACG GCCATCGCCT GGCTAACGGC TCCCTTTGCC
GGGGTTATGG CATCGTTTTA CACCCAGGAT CCACAGGTTA AACATGTCGT TGTGATTCTG
ATTTGGCTAA ATGCTTTATT TATGCCTATT TGGTCCGCTT CATGGGTGCT ACCCGCTGGA
TTTAAGGGGG CTCGTGACGC CCGTTACGCT ATGTGGGTTT CTATGTTGAG CATGTGGGGT
TGTCGGGTTG TCGTCGGTTA TGTGCTGGGC ATCATGCTTG GCTGGGGTGT GGTTGGTGTC
TGGATGGGAA TGTTTGCCGA CTGGGCTGTG CGGGCCGTGC TGTTTTACTG GCGAATGGTT
ACTGGACGTT GGCTGTGGAA ATACCCTCGA CCCGAACCGC AAAAGTGTGA AAAAAAGCCA
GCTGTGTCGG AATAA
 
Protein sequence
MNISSALRQV VHGTRWHAKR KSYKVLFWRE ITPFAVPIFM ENACVLLMGV LSTFLVSWLG 
KDAMAGVGLA DSFNMVIMAF FAAIDLGTTV VVAFSLGKRD RRRARVATRQ SLVIMTLFAV
LLATLIHHFG EQIIDFVAGD ATTEVKALAL TYLELTVLSY PAAAITLIGS GALRGAGNTK
IPLLINGSLN ILNIIISGIL IYGLFSWPGL GFVGAGLGLT ISRYIGAVAI LWVLAIGFNP
ALRISLKSYF KPLNFSIIWE VMGIGIPASV ESVLFTSGRL LTQMFVAGMG TSVIAGNFIA
FSIAALINLP GSALGSASTI ITGRRLGVGQ IAQAEIQLRH VFWLTTLGLT AIAWLTAPFA
GVMASFYTQD PQVKHVVVIL IWLNALFMPI WSASWVLPAG FKGARDARYA MWVSMLSMWG
CRVVVGYVLG IMLGWGVVGV WMGMFADWAV RAVLFYWRMV TGRWLWKYPR PEPQKCEKKP
AVSE