Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_2817 |
Symbol | |
ID | 6970349 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 2618574 |
End bp | 2619653 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 643386667 |
Product | site-specific recombinase, phage integrase family |
Protein accession | YP_002271143 |
Protein GI | 209399988 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000101654 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 71 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAAGAC GAAGGAAAAA TCCCGAACAC GAAAAATTAC CGCCAAAGGT ATACCCCAAT AAATATAGTG TATGGAAACC GACATCCAGA GAATCTGTAA CCTTAACTGC AATCGAGGAT GGTTTAGCCG CATTATGGAA AAAGTATGAA GAAACGGTTA ACCATCGCGA TCGCGCAATG ACATTTGGGC GTTTGTGGGA AAAATTTCTC GCCAGCGCCT ATTACAGCGA GCTTAGTCCT AGAACTCAAA AAGATTATCT GCAACATCAA AAAAAGCTGC TGGCCGTATT CGGTAAGGTG CTGGCCGATT CTGTAAAACC AGAGCACATC AGACGATACA TGGACAAAAG AGGCGAGCAG AGTAAAACGC AGGCAAACCA TGAAAAAAGC AGTATGTCGC GCGTTTATAG TTGGGGGTAT GAGCGAGGAT ACGTGAAGGC TAACCCATGT GCAGGTGTAA GTAAATTCAA GGCCAAAAAC CGCGAACGAT ATGTAACCGA CAAAGAATAC CAGGCAGTAT TAAGCGTTGC ACCTCTTCCT GTTTTTATCG CAATGGAAAT TGCCTATCTG TGTGCAGCGA GGGTTTCCGA TGTGTTATCG CTGAAATGGG AGCAGATTGG AAACGACGGG ATCTTTATCC AGCAAGGGAA AACAGGGAAA AAACAGATAA AAGCATGGAG TCCACGATTA CAGGCGGCGA TCGAAAAAGC AAAACAGTTA CCAACATCCG CCTATGTAAT CAGCAATCAA TACGGCAACC GATATATGTA CAAAGGCTTT AACGAAATGT GGGTAGAAGC AAGAAATCAC GCAGGCAAAA TTTCAGGTAT TTTAACCGAC TTCACCTTTC ATGATCTGAA GGCGAAAGGA ATTTCAGACT ATGAAGGAAG CAGCCGGGAT AAGCAACTTT TCTCTGGTCA CAAAACCGAA GGGCAAGTGC TAATCTATGA CAGGAAGGTT AAAGTTTCAC CAACACTTGA TGTCCCGTTA CCTGAAAATA TTCCAAGAAA ATATTCCAAG AAAATATTCC AAGTAATTCC AAGTGTGATT TTTGTCACTG ACTTAATGAT GTGTAAGTGA
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Protein sequence | MGRRRKNPEH EKLPPKVYPN KYSVWKPTSR ESVTLTAIED GLAALWKKYE ETVNHRDRAM TFGRLWEKFL ASAYYSELSP RTQKDYLQHQ KKLLAVFGKV LADSVKPEHI RRYMDKRGEQ SKTQANHEKS SMSRVYSWGY ERGYVKANPC AGVSKFKAKN RERYVTDKEY QAVLSVAPLP VFIAMEIAYL CAARVSDVLS LKWEQIGNDG IFIQQGKTGK KQIKAWSPRL QAAIEKAKQL PTSAYVISNQ YGNRYMYKGF NEMWVEARNH AGKISGILTD FTFHDLKAKG ISDYEGSSRD KQLFSGHKTE GQVLIYDRKV KVSPTLDVPL PENIPRKYSK KIFQVIPSVI FVTDLMMCK
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