Gene ECH74115_2728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_2728 
SymbolrcsA 
ID6970521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp2556125 
End bp2556748 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content38% 
IMG OID643386589 
Productcolanic acid capsular biosynthesis activation protein A 
Protein accessionYP_002271068 
Protein GI209399201 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value8.30515e-09 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value0.480733 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAACGA TTATTATGGA TTTATGTAGT TACACCCGAC TAGGTTTAAC CGGGTATCTG 
TTGAGTAGAG GGGTTAAAAA AAGAGAAATC AACGACATTG AAACCGTTGA TGACCTTGCC
ATAGCTTGTG ATTCACAGCG CCCTTCAGTG GTGTTTATTA ATGAGGACTG TTTCATCCAC
GATGCTTCTA ACAGTCAGCG TATCAAGCTC ATCATTAATC AACATCCCAA TACGTTATTT
ATCGTTTTTA TGGCAATTGC CAATGTTCAT TTTGATGAAT ATCTATTGGT CAGAAAAAAT
TTATTGATCA GTTCTAAATC GATTAAACCG GAATCTCTCG ACGATATCCT TGGCGATATT
CTGAAAAAAG AGACAACGAT AACCTCGTTT TTAAATATGC CGACGTTATC ATTGAGCCGA
ACCGAATCGA GTATGTTGCG AATGTGGATG GCAGGTCAGG GAACCATTCA AATCTCCGAC
CAAATGAATA TCAAAGCCAA GACCGTTTCA TCGCATAAAG GTAATATTAA ACGTAAGATC
AAAACGCATA ATAAACAGGT TATCTACCAT GTCGTCCGAC TGACGGATAA TGTGACTAAT
GGTATTTTTG TCAACATGCG CTAA
 
Protein sequence
MSTIIMDLCS YTRLGLTGYL LSRGVKKREI NDIETVDDLA IACDSQRPSV VFINEDCFIH 
DASNSQRIKL IINQHPNTLF IVFMAIANVH FDEYLLVRKN LLISSKSIKP ESLDDILGDI
LKKETTITSF LNMPTLSLSR TESSMLRMWM AGQGTIQISD QMNIKAKTVS SHKGNIKRKI
KTHNKQVIYH VVRLTDNVTN GIFVNMR