Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_2723 |
Symbol | fliN |
ID | 6967259 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 2553245 |
End bp | 2553658 |
Gene Length | 414 bp |
Protein Length | 137 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643386583 |
Product | flagellar motor switch protein FliN |
Protein accession | YP_002271062 |
Protein GI | 209396964 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1886] Flagellar motor switch/type III secretory pathway protein |
TIGRFAM ID | [TIGR02480] flagellar motor switch protein FliN |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0704854 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 0.317166 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGACA TGAATAATCC GGCCGATGAC AACAACGGCG CAATGGACGA TCTGTGGGCT GAAGCGTTGA GCGAACAAAA ATCAACCAGC AGCAAAAGCG CTGCCGACGC GGTGTTCCAG CAATTTGGCG GTGGTGATGT CAGCGGAACG TTGCAGGATA TCGACCTGAT TATGGATATT CCGGTCAAGC TGACCGTCGA GCTGGGCCGC ACACGAATGA CCATCAAAGA GCTGTTGCGT CTGACGCAAG GGTCCGTCGT GGCGCTGGAC GGTCTGGCGG GCGAACCACT GGATATTCTG ATCAACGGTT ATTTAATCGC CCAGGGCGAA GTGGTGGTCG TTGCCGATAA ATATGGCGTG CGGATCACCG ATATCATTAC TCCGTCTGAG CGAATGCGCC GCCTGAGCCG TTAG
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Protein sequence | MSDMNNPADD NNGAMDDLWA EALSEQKSTS SKSAADAVFQ QFGGGDVSGT LQDIDLIMDI PVKLTVELGR TRMTIKELLR LTQGSVVALD GLAGEPLDIL INGYLIAQGE VVVVADKYGV RITDIITPSE RMRRLSR
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