| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_2700 |
|---|
| Symbol | fliS |
|---|
| ID | 6966556 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | + |
|---|
| Start bp | 2535435 |
|---|
| End bp | 2535845 |
|---|
| Gene Length | 411 bp |
|---|
| Protein Length | 136 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 643386561 |
|---|
| Product | flagellar protein FliS |
|---|
| Protein accession | YP_002271040 |
|---|
| Protein GI | 209396257 |
|---|
| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1516] Flagellin-specific chaperone FliS |
|---|
| TIGRFAM ID | [TIGR00208] flagellar biosynthetic protein FliS |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 0.11516 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACGCGG CAAAAGGCAC CCAAGCCTAT GCACAAATTG GCGTCGAAAG CGCCGTAATG
AGCGCCAGCC AGCAGCAGCT GGTCACCATG CTATTTGATG GAGTGCTGAG CGCACTGGTT
AGAGCGCGCC TGTTTATGCA GGACAACAAT CAGCAAGGCA AAGGCGTCTC TTTGTCAAAA
GCGATCAACA TCATTGAGAA CGGACTGCGG GTGAGTCTTG ATGAAGAGAG CAAAGACGAA
CTAACCCAAA ACTTGATTGC TCTTTATAGC TATATGGTCA GGCGTTTGCT GCAAGCCAAT
TTACGCAACG ATGTCTCCGC AGTCGAAGAA GTGGAAACAT TAATGCGCAA TATTGCCGAT
GCCTGGAAAG AGTCGTTACT CTCCCCTTCT TTGATTCAGG ACCCAGTCTG A
|
|---|
| Protein sequence | MYAAKGTQAY AQIGVESAVM SASQQQLVTM LFDGVLSALV RARLFMQDNN QQGKGVSLSK
AINIIENGLR VSLDEESKDE LTQNLIALYS YMVRRLLQAN LRNDVSAVEE VETLMRNIAD
AWKESLLSPS LIQDPV
|
|---|
| |