Gene ECH74115_2649 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_2649 
Symbol 
ID6972236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp2499422 
End bp2500423 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content45% 
IMG OID643386512 
Productintegrase family protein 
Protein accessionYP_002270994 
Protein GI209395701 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.413706 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.000000656425 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCGGTTC GTAAGATTCC ATCAGGTAAA TGGCTTTGTG AATGTTATCC CTACGGGGCA 
TCGGGAAAAC GCATTCGTAA ACAGTTTGCG ACAAAAAGTG AGGCGCTCTC TTATGAGCGC
CGTTTAATGA ATAGTAGAGT TGGAGACGAG TTTCAAGATG GTTCTGGTCC TCGTCTTTCT
GAGTTGATTG CTCGTTGGTT TGAGATGTAC GGTAAAACCT TGTCCTCTGG TGCAGAGCGC
AAAGTCAAAC TTGAGGCGAT TTGTTCCAGG CTGGGAGATC CATTTGCTTC TCAGTTTGAC
AAAAATATGT TTGCTACTTA TCGGGAAAGA AGGCTATCAG GAGAATGGAA TCCCAAGGGG
AAGAAAAAAC TTAGTGAAGC AACCGTTAAT CGCGAGCAGT CATATCTACA TGCTGTTTTT
GCCGAACTGA AGCGCCTTGG GGAGTGGTCT GGTGAAAACC CCCTGACTGG TATTCGCAAG
TTTCGTGAGG AAGAAAAGGA ACTGGCGTTT CTGTATGTAG ATGAGATTGA ACGCCTTCTG
ATTGCGTGTG ATGAGTCACG GAATAAAGAT TTGGGGGTTG TTGTCCGTAT TGGGCTTGCG
ACTGGTGCTC GGTGGAGTGA AGCAGAAGGA TTAAAGCAAT CTCAAGTACT GCCCGGTCGA
ATCACATTTG TTAAAACTAA AGGAAAGAAG AACCGCACTG TACCGATTTC ACCTCAATTG
CAAGCTATGC TTCCTAAAAA ACGAGGAGCG CTATTTTCAC CATGTTATGA GGCTTTTGAC
GCTGCAATTA AGAGAGCGAA GATCGAGCTT CCTGATGGGC AATTAACTCA TGTGCTACGT
CACACGTTTG CCAGTCATTT TATGATGCGG GGTGGAAATA TTCTTGTGTT GCAAAAAATA
CTGGGGCATA GCGATATAAA AATGACTATG CGTTATGCGC ATTTTGCTCC AGGTCATTTA
GAGGCTGCTG TTGAATTGAA CCCTTTTGAC AATAGAGGGT AA
 
Protein sequence
MSVRKIPSGK WLCECYPYGA SGKRIRKQFA TKSEALSYER RLMNSRVGDE FQDGSGPRLS 
ELIARWFEMY GKTLSSGAER KVKLEAICSR LGDPFASQFD KNMFATYRER RLSGEWNPKG
KKKLSEATVN REQSYLHAVF AELKRLGEWS GENPLTGIRK FREEEKELAF LYVDEIERLL
IACDESRNKD LGVVVRIGLA TGARWSEAEG LKQSQVLPGR ITFVKTKGKK NRTVPISPQL
QAMLPKKRGA LFSPCYEAFD AAIKRAKIEL PDGQLTHVLR HTFASHFMMR GGNILVLQKI
LGHSDIKMTM RYAHFAPGHL EAAVELNPFD NRG