| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_2632 |
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| Symbol | uspC |
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| ID | 6969648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 2487199 |
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| End bp | 2487627 |
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| Gene Length | 429 bp |
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| Protein Length | 142 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 643386495 |
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| Product | universal stress protein UspC |
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| Protein accession | YP_002270977 |
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| Protein GI | 209400371 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00097653 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0000000000000132668 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAGCTATA GCAATATTCT TGTCGCTGTT GCGGTTACAC CGGAAAGTCA GCAACTGCTG
GCAAAAGCGG TATCTATCGC CAGGCCAGTA AAGGGACACA TCAGTTTAAT TACTCTCGCT
TCCGACCCGG AAATGTACAA TCAATTAGCT GCGCCGATGC TTGAAGATTT ACGCAGCGTG
ATGCAGGAAG AAACGCAAAG CTTTCTTGAT AAGTTAATTC AGGATGCGGG GTATCCCGTT
GACAAGACGT TTATTGCCTA CGGTGAGTTA AGCGAACATA TTCTGGAAGT TTGTCGCAAA
TATCATTTCG ATTTGGTGAT TTGCGGTAAT CACAATCACA GTTTCTTTTC GCGAGCATCC
TGCTCGGCGA AAAGAGTGAT TGCCTCAAGT GAGGTCGATG TGCTGTTAGT TCCACTTACG
GGAGATTAA
|
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| Protein sequence | MSYSNILVAV AVTPESQQLL AKAVSIARPV KGHISLITLA SDPEMYNQLA APMLEDLRSV
MQEETQSFLD KLIQDAGYPV DKTFIAYGEL SEHILEVCRK YHFDLVICGN HNHSFFSRAS
CSAKRVIASS EVDVLLVPLT GD
|
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