| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_2631 |
|---|
| Symbol | flhD |
|---|
| ID | 6967137 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | - |
|---|
| Start bp | 2486069 |
|---|
| End bp | 2486419 |
|---|
| Gene Length | 351 bp |
|---|
| Protein Length | 116 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 643386494 |
|---|
| Product | transcriptional activator FlhD |
|---|
| Protein accession | YP_002270976 |
|---|
| Protein GI | 209398587 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00000042575 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00000000000000177734 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGCATACCT CCGAGTTGCT GAAACACATT TATGACATCA ACTTGTCATA TTTACTACTT
GCACAGCGTC TGATTGTTCA GGACAAAGCG TCCGCTATGT TTCGTCTCGG CATAAATGAA
GAAATGGCGA CAACATTAGC GGCACTGACT CTTCCGCAAA TGGTTAAGCT GGCAGAAACC
AATCAGCTGG TTTGTCACTT CCGTTTTGAC AGCCACCAGA CGATTACTCT GTTGACGCAA
GATTCCCGCG TTGACGATCT CCAGCAAATT CATACCGGCA TCATGCTCTC AACACGCTTG
CTGAATGATG TTAATCAGCC TGAAGAAGCG CTGCGCAAGA AAAGGGCCTG A
|
|---|
| Protein sequence | MHTSELLKHI YDINLSYLLL AQRLIVQDKA SAMFRLGINE EMATTLAALT LPQMVKLAET
NQLVCHFRFD SHQTITLLTQ DSRVDDLQQI HTGIMLSTRL LNDVNQPEEA LRKKRA
|
|---|
| |