| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_2554 |
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| Symbol | cspC |
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| ID | 6971895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 2415350 |
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| End bp | 2415559 |
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| Gene Length | 210 bp |
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| Protein Length | 69 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 643386421 |
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| Product | cold shock-like protein CspC |
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| Protein accession | YP_002270903 |
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| Protein GI | 209397128 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000810099 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAAAGA TTAAAGGTCA GGTTAAGTGG TTCAACGAGT CTAAAGGTTT TGGCTTCATT
ACTCCTGCTG ATGGCAGCAA AGACGTGTTC GTACACTTCT CCGCTATCCA GGGTAATGGC
TTCAAAACTC TGGCTGAAGG TCAGAACGTT GAGTTCGAAA TTCAGGACGG CCAGAAAGGT
CCGGCAGCTG TTAACGTAAC AGCTATCTGA
|
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| Protein sequence | MAKIKGQVKW FNESKGFGFI TPADGSKDVF VHFSAIQGNG FKTLAEGQNV EFEIQDGQKG
PAAVNVTAI
|
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| |