Gene ECH74115_2553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_2553 
Symbol 
ID6971350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp2413812 
End bp2414378 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content52% 
IMG OID643386419 
Producthypothetical protein 
Protein accessionYP_002270901 
Protein GI209398962 
COG category[S] Function unknown 
COG ID[COG1971] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000161529 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATCA CTGCTACTGT TCTTCTTGCG TTTGGTATGT CGATGGATGC ATTTGCTGCA 
TCAATCGGTA AAGGTGCCAC CCTCCATAAA CCGAAATTTT CTGAAGCATT GCGAACCGGC
CTTATTTTTG GTGCCGTCGA AACCCTGACG CCGCTGATCG GCTGGGGAAT GGGCATGTTA
GCCAGCCGGT TTGTCCTTGA ATGGAATCAC TGGATTGCGT TTGTGCTGCT GATATTCCTC
GGCGGGCGAA TGATTATTGA GGGTTTTCGT GGCGCAGATG ATGAAGATGA AGAGCCGCGC
CGTCGGCACG GTTTCTGGCT ACTGGTAACC ACCGCGATTG CCACCAGCCT GGATGCCATG
GCTGTGGGTG TTGGTCTTGC TTTCCTTCAG GTCAACATTA TCGCGACCGC ATTGGCCATT
GGTTGTGCAA CCTTGATTAT GTCGACATTA GGGATGATGG TTGGTCGCTT TATCGGCTCA
ATTATTGGGA AAAAAGCGGA AATTCTCGGC GGGCTGGTGC TGATCGGCAT CGGCGTCCAG
ATCCTCTGGA CGCACTTCCA CGGTTAA
 
Protein sequence
MNITATVLLA FGMSMDAFAA SIGKGATLHK PKFSEALRTG LIFGAVETLT PLIGWGMGML 
ASRFVLEWNH WIAFVLLIFL GGRMIIEGFR GADDEDEEPR RRHGFWLLVT TAIATSLDAM
AVGVGLAFLQ VNIIATALAI GCATLIMSTL GMMVGRFIGS IIGKKAEILG GLVLIGIGVQ
ILWTHFHG