Gene ECH74115_2532 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_2532 
SymbolfadD 
ID6972304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp2396184 
End bp2397869 
Gene Length1686 bp 
Protein Length561 aa 
Translation table11 
GC content52% 
IMG OID643386400 
Productlong-chain-fatty-acid--CoA ligase 
Protein accessionYP_002270882 
Protein GI209397101 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0895322 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGAAGG TTTGGCTTAA CCGTTATCCC GCGGACGTTC CGACGGAGAT CAACCCTGAC 
CGTTATCAAT CTCTGGTAGA TATGTTTGAG CAGTCGGTCG CGCGCTACGC CGATCAGCCT
GCGTTTGTGA ATATGGGGGA GGTGATGACC TTCCGCAAGC TGGAAGAACG CAGTCGCGCG
TTTGCCGCTT ATTTGCAACA AGGGTTGGGG CTGAAGAAAG GCGATCGCGT TGCGTTGATG
ATGCCTAATT TATTGCAATA TCCGGTGGCG CTGTTTGGCA TTTTGCGTGC CGGGATGATC
GTCGTAAACG TTAACCCGTT GTATACCCCG CGTGAGCTTG AGCATCAGCT TAACGATAGC
GGCGCATCGG CGATTGTCAT TGTGTCCAAC TTTGCTCACA CGCTGGAAAA AGTGGTCGAT
AAAACCGCAG TTCAGCACGT TATCCTGACC CGTATGGGCG ATCAGCTTTC CACAGCGAAA
GGCACACTGG TTAACTTCGT TGTTAAATAC ATCAAACGTC TGGTGCCGAA ATATCATCTG
CCAGATGCCA TTTCATTTCG TAGCGCCCTG CACAACGGCT ACCGTATGCA GTATGTCAAA
CCTGAACTGG TGCCAGAAGA TTTAGCCTTC CTGCAATACA CTGGCGGCAC CACAGGTGTG
GCGAAAGGCG CGATGCTGAC TCACCGCAAT ATGCTGGCGA ACCTGGAACA AGTTAACGCT
ACGTATGGGC CTCTGCTGCA TCCGGGCAAA GAGCTGGTGG TGACGGCGCT GCCGCTGTAT
CACATTTTTG CACTGACCAT TAACTGCCTG CTGTTTATCG AACTGGGTGG GCAGAACCTG
CTTATCACTA ACCCGCGGGA TATTCCGGGG CTGGTCAAAG AGCTGGCGAA ATATCCGTTT
ACCGCTATCA CCGGCGTAAA CACCTTGTTC AACGCGTTGC TGAACAATAA AGAGTTTCAA
CAACTGGATT TCTCCAGTCT GCACCTTTCT GCAGGCGGTG GGATGCCTGT TCAGCAAGTG
GTGGCAGAAC GCTGGGTGAA ACTGACCGGA CAGTATCTGC TGGAAGGTTA TGGCCTGACC
GAATGTGCGC CGCTGGTCAG CGTGAACCCC TATGATATTG ATTATCATAG CGGTAGCATT
GGTTTGCCGG TGCCGTCGAC GGAAGCCAAA CTGGTGGATG ACGACGATAA TGAAGTATCG
CCAGGTCAGC CAGGTGAACT TTGCGTCAGA GGTCCACAGG TGATGCTGGG CTATTGGCAG
CGTCCGGATG CTACCGATGA AATCATCAAA AACGGCTGGT TACACACTGG CGACATCGCG
GTAATGGATG AAGAAGGATT CCTGCGCATT GTCGATCGTA AAAAAGACAT GATTTTGGTT
TCCGGTTTTA ACGTCTATCC CAACGAGATT GAAGATGTCG TCATGCAGCA TCCTGGCGTA
CAGGAAGTCG CGGCTGTTGG TGTACCTTCC GGCTCCAGTG GTGAAGCGGT GAAAATCTTC
GTAGTGAAAA AAGATCCATC GCTTACCGAA GAGTCACTGG TGACCTTTTG CCGCCGTCAG
CTCACGGGCT ACAAAGTACC GAAGCTGGTG GAGTTTCGTG ATGAGTTACC GAAATCTAAC
GTCGGAAAAA TTTTGCGACG AGAATTACGT GACGAAGCGC GCGGCAAAGT GGACAATAAA
GCCTGA
 
Protein sequence
MKKVWLNRYP ADVPTEINPD RYQSLVDMFE QSVARYADQP AFVNMGEVMT FRKLEERSRA 
FAAYLQQGLG LKKGDRVALM MPNLLQYPVA LFGILRAGMI VVNVNPLYTP RELEHQLNDS
GASAIVIVSN FAHTLEKVVD KTAVQHVILT RMGDQLSTAK GTLVNFVVKY IKRLVPKYHL
PDAISFRSAL HNGYRMQYVK PELVPEDLAF LQYTGGTTGV AKGAMLTHRN MLANLEQVNA
TYGPLLHPGK ELVVTALPLY HIFALTINCL LFIELGGQNL LITNPRDIPG LVKELAKYPF
TAITGVNTLF NALLNNKEFQ QLDFSSLHLS AGGGMPVQQV VAERWVKLTG QYLLEGYGLT
ECAPLVSVNP YDIDYHSGSI GLPVPSTEAK LVDDDDNEVS PGQPGELCVR GPQVMLGYWQ
RPDATDEIIK NGWLHTGDIA VMDEEGFLRI VDRKKDMILV SGFNVYPNEI EDVVMQHPGV
QEVAAVGVPS GSSGEAVKIF VVKKDPSLTE ESLVTFCRRQ LTGYKVPKLV EFRDELPKSN
VGKILRRELR DEARGKVDNK A