| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_2502 |
|---|
| Symbol | msrB |
|---|
| ID | 6969537 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | - |
|---|
| Start bp | 2369912 |
|---|
| End bp | 2370325 |
|---|
| Gene Length | 414 bp |
|---|
| Protein Length | 137 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 643386371 |
|---|
| Product | methionine sulfoxide reductase B |
|---|
| Protein accession | YP_002270853 |
|---|
| Protein GI | 209396138 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase |
|---|
| TIGRFAM ID | [TIGR00357] methionine-R-sulfoxide reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0000890952 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAATA AACCTTCGGC AGAAGAACTG AAAAAAAATT TGTCCGAGAT GCAGTTTTAC
GTGACGCAGA ATCATGGGAC AGAGCCGCCA TTTACGGGTC GTTTACTGCA TAACAAGCGT
GACGGCGTAT ATCACTGTTT GATCTGCGAT GCCCCGCTGT TTCATTCCCA AACCAAGTAT
GATTCCGGCT GTGGCTGGCC CAGTTTCTAC GAACCGGTGA GTGAAGAATC CATTCGTTAT
ATCAAAGACT TGTCACATGG AATGCAGCGC ATAGAAATTC GTTGCGGTAA CTGTGATGCC
CATCTGGGGC ATGTCTTCCC TGACGGGCCG CAGCCAACGG GCGAACGTTA TTGTGTTAAC
TCTGCTTCTT TACGCTTCAC TGATGGTGAA AACGGCGAAG AAATCAACGG TTGA
|
|---|
| Protein sequence | MANKPSAEEL KKNLSEMQFY VTQNHGTEPP FTGRLLHNKR DGVYHCLICD APLFHSQTKY
DSGCGWPSFY EPVSEESIRY IKDLSHGMQR IEIRCGNCDA HLGHVFPDGP QPTGERYCVN
SASLRFTDGE NGEEING
|
|---|
| |