Gene ECH74115_2426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_2426 
Symbol 
ID6968565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp2298275 
End bp2298739 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content49% 
IMG OID643386296 
Productlipoprotein, NlpC/P60 family 
Protein accessionYP_002270778 
Protein GI209396057 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones87 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTTCT GCCTTATTTT GATCACAGCA CTGTTTCTGG CCGGGTGTAG CCACCATAAA 
GCACCGCCGC CAAATGCCAG ACTTTCTGAT TCGATTACCG TTATTGCCGG TTTGAACGAC
CAGCTACAAA GCTGGCATGG CACGCCGTAT CGTTATGGTG GCATGACGCG GCGCGGTGTG
GACTGTTCGG GATTTGTGGT TGTGACGATG CGCGATCGTT TCGATTTGCA GCTGCCCCGA
GAAACCAAAG AACAAGCCTC TATCGGCACG CAAATTGATA AAGACGAGTT GCTGCCTGGT
GACCTGGTCT TTTTCAAAAC GGGTTCCGGA CAAAATGGTT TGCATGTAGG TATTTACGAT
ACCAACAACC AATTTATCCA CGCCTCTACC AGCAAGGGAG TGATGCGTTC CTCACTTGAT
AATGTCTATT GGCAGAAAAA TTTCTGGCAG GCGAGACGAA TCTAG
 
Protein sequence
MRFCLILITA LFLAGCSHHK APPPNARLSD SITVIAGLND QLQSWHGTPY RYGGMTRRGV 
DCSGFVVVTM RDRFDLQLPR ETKEQASIGT QIDKDELLPG DLVFFKTGSG QNGLHVGIYD
TNNQFIHAST SKGVMRSSLD NVYWQKNFWQ ARRI