| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_2350 |
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| Symbol | pdxH |
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| ID | 6970050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 2223373 |
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| End bp | 2224029 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 643386224 |
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| Product | pyridoxamine 5'-phosphate oxidase |
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| Protein accession | YP_002270708 |
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| Protein GI | 209398060 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0259] Pyridoxamine-phosphate oxidase |
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| TIGRFAM ID | [TIGR00558] pyridoxamine-phosphate oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0623202 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTGATA ACGACGAATT GCAGCAAATC GCGCATCTGC GCCGTGAATA CACCAAAGGC
GGGTTACGCC GCCGCGATCT TCCCGCCGAT CCATTAACCC TTTTTGAACG TTGGCTCTCT
CAGGCTTGTG AAGCCAAACT GGCGGACCCT ACCGCGATGG TGGTCGCTAC CGTGGATGAA
CATGGTCAGC CTTATCAGCG CATCGTTTTA CTCAAACATT ACGACGAAAA AGGCATGGTG
TTTTACACCA ACCTCGGTAG CCGTAAAGCA CATCAAATTG AAAATAATCC GCGCGTTAGC
CTGCTGTTCC CGTGGCATAC CCTTGAACGC CAGGTGATGG TGATCGGTAA AGCAGAACGA
CTTTCGACTC TCGAAGTGAT GAAATATTTT CATAGCCGCC CGCGTGATAG CCAGATTGGT
TCATGGGTTT CGAAGCAGTC CAGTCGCATT TCTGCCCGCG GTATCCTTGA AAGTAAATTC
CTGGAGCTGA AGCAGAAGTT TCAACAAGGC GAAGTGCCAT TGCCGAGCTT TTGGGGCGGT
TTTCGCGTCA GCCTTGAACA GATTGAGTTC TGGCAGGGCG GTGAGCATCG CCTGCATGAC
CGCTTTTTGT ACCAGCGTGA AAATGATGCG TGGAAGATTG ATCGTCTTGC ACCCTGA
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| Protein sequence | MSDNDELQQI AHLRREYTKG GLRRRDLPAD PLTLFERWLS QACEAKLADP TAMVVATVDE
HGQPYQRIVL LKHYDEKGMV FYTNLGSRKA HQIENNPRVS LLFPWHTLER QVMVIGKAER
LSTLEVMKYF HSRPRDSQIG SWVSKQSSRI SARGILESKF LELKQKFQQG EVPLPSFWGG
FRVSLEQIEF WQGGEHRLHD RFLYQRENDA WKIDRLAP
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