Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_2318 |
Symbol | rstA |
ID | 6970153 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 2188255 |
End bp | 2188974 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 643386196 |
Product | DNA-binding transcriptional regulator RstA |
Protein accession | YP_002270680 |
Protein GI | 209400881 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0386418 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 68 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACTA TCGTATTTGT GGAAGATGAT GCGGAAGTCG GTTCACTGAT TGCCGCGTAC CTGGCAAAAC ATGATATACA GGTTACCGTA GAGCCGCGCG GCGACCAGGC CGAAGAAACC ATTTTGCGAG AAAATCCGGA TTTGGTGTTA CTCGACATCA TGCTACCAGG CAAGGACGGC ATGACCATTT GTCGTGATTT ACGCGCAAAG TGGTCCGGAC CGATTGTTCT TCTAACCTCT CTCGATAGCG ATATGAACCA CATCCTGGCA CTGGAAATGG GTGCCTGCGA CTATATTCTC AAAACGACGC CCCCTGCTGT TTTGTTAGCG CGTTTACGTT TGCATTTGCG TCAGAATGAG CAAGCCACGC TGACCAAAGG TCTTCAGGAA ACGTCACTGA CTCCCTACAA AGCCCTGCAT TTCGGCACGT TGACCATCGA TCCTATCAAC CGCGTAGTCA CCCTGGCTAA CACTGAAATC TCGCTCTCGA CAGCTGATTT CGAATTATTG TGGGAATTAG CTACCCATGC CGGGCAAATC ATGGACCGCG ATGCATTGCT GAAAAATTTA CGCGGCGTCA GTTATGACGG CCTGGATCGT AGCGTGGACG TGGCTATTTC GCGGTTAAGA AAAAAACTGC TCGATAACGC CGCTGAACCT TATCGCATTA AAACTGTGCG TAACAAAGGC TATCTTTTTG CGCCTCATGC ATGGGAATAA
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Protein sequence | MNTIVFVEDD AEVGSLIAAY LAKHDIQVTV EPRGDQAEET ILRENPDLVL LDIMLPGKDG MTICRDLRAK WSGPIVLLTS LDSDMNHILA LEMGACDYIL KTTPPAVLLA RLRLHLRQNE QATLTKGLQE TSLTPYKALH FGTLTIDPIN RVVTLANTEI SLSTADFELL WELATHAGQI MDRDALLKNL RGVSYDGLDR SVDVAISRLR KKLLDNAAEP YRIKTVRNKG YLFAPHAWE
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