Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_2211 |
Symbol | |
ID | 6970538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 2107205 |
End bp | 2107843 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 643386102 |
Product | putative repressor protein encoded within prophage CP-933O |
Protein accession | YP_002270589 |
Protein GI | 209400263 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000372098 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 7.21375e-19 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACAAGC AAACAATATC TGAACGCATA ACCCAACGTA TGCATGCGCT AAACTTGAAA GGCAAAGACC TTGTCAATGC CACTGGCGCA TCAAAAGGCT CCGTAAGTCA ATGGATGAAC GGTGGAGGAG CGCCGTCCTC GCGTTACATA AGTTCACTGG CAAAGATATT GAAAGTAAAC GAAAATTGGC TTCTTAATGG AGGAGAGTTA AATACAGGTG ATTCGCTTGA TCTATCTTTA CCGCCGATAA AAACGGTTCC GCTACTATCA CTTCAGCAGG CAGCAAGCTG GAGTGATTAT ATGAAAAATT CCTCAATAAC CTCTTGTGTG CAGCTTGTCG GAGAAATCCC GGCCAATACC TTTGCTGTTG TTCTAGAGAG TGACAGTATG TCGACATCTG GTGGTGGAGT TTCCATCCCA AATGGTTCAA CAGTTTTTGT TGATCCCGAT CGAATCGTAC AACCAGGAAA TATTGTCCTT GCCTTACCCA AAGGGACCAC AACGCCTGTC ATTCGCAAAC TGGAGATAGA AGGGCCGGAT ATTCTTTTAG TCCCCACGAA TCCTCGCTAC CCTTCAATTA TGCTGGATGA TCTATCTTGC ATATTGGGAG TATGCTTTAA AATTCAACAA GATATTTAA
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Protein sequence | MNKQTISERI TQRMHALNLK GKDLVNATGA SKGSVSQWMN GGGAPSSRYI SSLAKILKVN ENWLLNGGEL NTGDSLDLSL PPIKTVPLLS LQQAASWSDY MKNSSITSCV QLVGEIPANT FAVVLESDSM STSGGGVSIP NGSTVFVDPD RIVQPGNIVL ALPKGTTTPV IRKLEIEGPD ILLVPTNPRY PSIMLDDLSC ILGVCFKIQQ DI
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