| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_2139 |
|---|
| Symbol | |
|---|
| ID | 6968012 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | + |
|---|
| Start bp | 2053815 |
|---|
| End bp | 2054696 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 643386036 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_002270525 |
|---|
| Protein GI | 209399635 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.487971 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 71 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCTGA CCCAACTGGA GATGTTCAAC GCGGTTGCCG AAGCTGGCAG CATTACGCAG
GCTGCAGCAA TAGTGCATCG CGTGCCGTCG AATCTCACTA CCCGTCTACG CCAGCTGGAA
ACAGAACTGG GGGTAGATCT GTTTATTCGC GAGAATCAGC GTTTACGTCT ATCTCCTGCC
GGGCATAACT TTTTACGCTA TAGCCAACAA ATTCTCGCGT TAGTGGATGA AGCGCGGAGC
GTTGTCGCTG GCGATGAGCC GCAAGGTTTA TTTTCTCTGG GTTCGCTGGA AAGCACCGCA
GCAGTTCGCA TTCCGGCCAC GCTGGCGGAA TTCAACCGTC GTTATCCCAA AATTCAGTTT
TCACTTTCCA CCGGCCCTTC CGGCACTATG CTGGAAGGTG TGCTGGAGGG AAAACTTAAT
GCGGCGTTTA TTGATGGACC CATTAACCAT ACTGCCATTG ACGGGATACC GGTATACCGC
GAGGAGCTGA TGATCGTCAC GCCACAAGGT CATGCGCCAG TAATCCGTGC CAGTCAGGTT
AATGGCAGTA ACATTTATGC CTTCCGCGCC AATTGTTCGT ATCGTCGCCA CTTCGAGAGC
TGGTTTCATG CTGACGGTGC CGCTCCGGGA ACTATCCATG AGATGGAGTC TTATCACGGA
ATGTTGGCCT GTGTGGTCGC AGGAGCAGGT ATTGCGCTTA TTCCGCGCTC TATGCTGGAA
AGTATGCCGG GGCATCACCA GGTTGAAGCG TGGCCGTTAG CTGAGCAATG GTGTTGGCTA
ACAACCTGGC TGGTCTGGCG TCGTGGTGCG AAAACGCGTC CGCTCGAGGC ATTTATTCAA
CTACTGGATG TGCCTGACTC GACAAAACAG GGTTACCAAT GA
|
|---|
| Protein sequence | MDLTQLEMFN AVAEAGSITQ AAAIVHRVPS NLTTRLRQLE TELGVDLFIR ENQRLRLSPA
GHNFLRYSQQ ILALVDEARS VVAGDEPQGL FSLGSLESTA AVRIPATLAE FNRRYPKIQF
SLSTGPSGTM LEGVLEGKLN AAFIDGPINH TAIDGIPVYR EELMIVTPQG HAPVIRASQV
NGSNIYAFRA NCSYRRHFES WFHADGAAPG TIHEMESYHG MLACVVAGAG IALIPRSMLE
SMPGHHQVEA WPLAEQWCWL TTWLVWRRGA KTRPLEAFIQ LLDVPDSTKQ GYQ
|
|---|
| |