| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_2132 |
|---|
| Symbol | tam |
|---|
| ID | 6967738 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | + |
|---|
| Start bp | 2045869 |
|---|
| End bp | 2046627 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 643386029 |
|---|
| Product | trans-aconitate 2-methyltransferase |
|---|
| Protein accession | YP_002270518 |
|---|
| Protein GI | 209399847 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4106] Trans-aconitate methyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.523623 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 66 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGACT GGAACCCCTC TTTATATCTG CACTTTGCCG CTGAACGATC GCGTCCGGCG
GTGGAGCTGC TTGCCAGAGT GCCGCTGGAG AATGTCGATT ATGTTGCCGA TCTTGGCTGT
GGCCCAGGTA ACAGCACCGC CCTGCTGCAT CAACGTTGGC CTGCTGCCAG GATAACGGGC
ATCGACTCGT CTCCGGCGAT GATTGCTGAA GCGCGCAGTG CTTTGCCAGA CTGCCAGTTC
GTGGAAGCAG ACATCCGCAA CTGGCAACCG GAACAGGCAC TCGATCTGAT TTTTGCTAAT
GCCTCACTGC AATGGCTGCC CGACCACTAC GAATTGTTTC CTCACTTGGT TTCTTTACTT
AATCCGCAGG GCGTGCTGGC AGTACAGATG CCAGATAACT GGCTGGAGCC GACCCATGTG
CTCATGCGCG AAGTTGCCTG GGAACAAAAC TACCCGGATC GCGGGCGTGA GTCGTTGGCT
GGTGTTCATG CTTACTACGA TATTTTGAGC GAAGCCGGAT GTGAGGTCGA TATCTGGCGA
ACCACCTACT ATCACCAGAT GCCGTCGCAC CAGGCGATTA TCGATTGGGT GACCGCCACT
GGATTACGTC CGTGGTTACA GGATCTGACC GAGAGCGAAC AGCAGCTTTT TCTTACGCGC
TACCATCAGA TGCTGAAAGA GCAGTATCCA CTGCAAGAGA ACGGACAGAT ACTGCTGGCA
TTTCCGCGTC TGTTTATTGT TGCCCGCCGT ACGGAGTAA
|
|---|
| Protein sequence | MSDWNPSLYL HFAAERSRPA VELLARVPLE NVDYVADLGC GPGNSTALLH QRWPAARITG
IDSSPAMIAE ARSALPDCQF VEADIRNWQP EQALDLIFAN ASLQWLPDHY ELFPHLVSLL
NPQGVLAVQM PDNWLEPTHV LMREVAWEQN YPDRGRESLA GVHAYYDILS EAGCEVDIWR
TTYYHQMPSH QAIIDWVTAT GLRPWLQDLT ESEQQLFLTR YHQMLKEQYP LQENGQILLA
FPRLFIVARR TE
|
|---|
| |