| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_2125 |
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| Symbol | lsrR |
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| ID | 6971400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 2038811 |
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| End bp | 2039764 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 643386022 |
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| Product | transcriptional repressor LsrR |
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| Protein accession | YP_002270511 |
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| Protein GI | 209397971 |
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| COG category | [K] Transcription |
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| COG ID | [COG2390] Transcriptional regulator, contains sigma factor-related N-terminal domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAATCA ACGATTCGGT AATTTCAGAA CAGGGAATGT GTGAAGAAGA ACAGGTCGCG
CGGATCGCGT GGTTTTACTA CCACGACGGG CTGACCCAGA GTGAGATCAG CGATCGTCTC
GGCCTGACCC GTTTGAAAGT GTCGCGATTA CTGGAGAAAG GGCATCAGTC CGGCATCATT
CGCGTGCAGA TTAATTCTCG CTTTGAAGGC TGTCTGGAAT ATGAAACACA ATTACGTCGT
CAGTTTTCGC TGCAACATGT CCGGGTGATC CCTGGGCTTG CGGATGCTGA TGTCGGCGGG
CGACTGGGGA TAGGCGCGGC GCATATGTTG ATGAGTTTAC TTCAACCACA ACAGATGCTG
GCGATTGGTT TTGGCGAGGC AACCATGAAT ACGCTGCAAC GCTTAAGTGG TTTTATTTCG
TCACAGCAAA TTCGCCTGGT CACGCTCTCC GGTGGCGTCG GTTCTTATAT GACGGGTATC
GGACAGCTTA ATGCGGCGTG CAGTGTGAAT ATTATTCCGG CTCCGTTGCG GGCATCCTCC
GCTGACATTG CCCGTACGCT AAAAAATGAA AATTGTGTCA AAGATGTTCT GTTAGCCGCG
CAAGCAGCGG ATGTGGCGAT TGTCGGCATT GGGGCCGTTA GTCAACAAGA CGACGCGACG
ATCATTCGCT CCGGTTATAT CAGCCAGGGC GAACAGTTAA TGATTGGCCG AAAAGGGGCG
GTTGGCGACA TTTTAGGCTA CTTTTTTGAT GCAAAAGGTG ACGTTGTCAC GGACATTAAA
ATACATAACG AGCTGATTGG CTTACCTTTA AGCGCGCTGA AGACCATACC CGTCCGGGTT
GGCGTGGCAG GGGGAGAAAA TAAAGCCGAA GCAATTGCCG CTGCAATGAA AGGCGGTTAT
ATCAACGCAC TGGTTACCGA TCAGGACACA GCAGCGGCGA TTTTACGTAG TTAA
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| Protein sequence | MTINDSVISE QGMCEEEQVA RIAWFYYHDG LTQSEISDRL GLTRLKVSRL LEKGHQSGII
RVQINSRFEG CLEYETQLRR QFSLQHVRVI PGLADADVGG RLGIGAAHML MSLLQPQQML
AIGFGEATMN TLQRLSGFIS SQQIRLVTLS GGVGSYMTGI GQLNAACSVN IIPAPLRASS
ADIARTLKNE NCVKDVLLAA QAADVAIVGI GAVSQQDDAT IIRSGYISQG EQLMIGRKGA
VGDILGYFFD AKGDVVTDIK IHNELIGLPL SALKTIPVRV GVAGGENKAE AIAAAMKGGY
INALVTDQDT AAAILRS
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