| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_2118 |
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| Symbol | |
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| ID | 6968645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 2024700 |
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| End bp | 2026922 |
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| Gene Length | 2223 bp |
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| Protein Length | 740 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 643386016 |
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| Product | fimbrial usher family protein |
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| Protein accession | YP_002270505 |
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| Protein GI | 209396439 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 0.167309 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGTCGACG CATCAACTGA GTTTGATGTT GGTCAGCAAC ATCTGTCACT CTCCGTTCCG
CAAATTTATG TTGGCAGAAT GGCTCGCGGC TATGTTTCTC CTGATCTGTG GGAAGAAGGA
ATAAATGCTG GGCTTCTAAA CTATAGTTTT AATGGTAATT CTATTAATAA TCGTAGTAAC
CATAATGCAG GAAAATCCAA CTATGCATAT TTGAATTTAC AGAGTGGCAT CAACATTGGT
AGTTGGCGAC TACGCGATAA CTCAACGTGG AGTTATAACA GTGGGAGTAG CAATTCATCT
GACAGCAATA AATGGCAGCA TATCAATACG TCGGCTGAAC GTGACATTAT TCCCTTACGC
TCACGGTTAA CGGTAGGTGA TAGTTATACC GATGGCGATA TTTTTGATAG TGTGAACTTT
CGTGGCCTCA AAATAAATTC AACAGAAGCG ATGTTGCCCG ATAGCCAACA TGGTTTCGCT
CCGGTGATTC ATGGTATTGC CCGTGGCACC GCACAAGTGA GTGTAAAACA GAACGGATAC
GATGTTTATC AGACTACTGT TCCACCCGGC CCTTTTACTA TTGATGATAT CAACTCTGCG
GCCAATGGTG GTGATCTGCA AGTAACCATA AAAGAGGCAG ACGGCAGTAT TCAGACATTA
TATGTTCCTT ATTCGTCTGT TCCGGTTCTC CAACGTGCTG GATATACGCG TTATGCGCTT
GCCATGGGGG AATATCGTAG TGGAAATAAC CTGCAAAGCT CCCCCAGGTT CATACAAGGT
AGCTTGATGC ATGGACTGGA AGGAAACTGG ACACCTTATG GCGGAATGCA AATTGCAGAA
GATTATCAGG CCTTCAACCT TGGTATTGGT AAAGATTTAG GACTTTTTGG TGCCTTTTCT
TTCGATATCA CGCAGGCCAA TACGACACTT GCAGATGGCA CCCGTCACAG CGGGCAATCG
GTTAAATCCG TCTACAGCAA ATCCTTCTAC CAGACAGGAA CCAATATCCA GGTCGCAGGA
TATCGCTATT CTACGCAAGG TTTTTATAAC TTATCCGACA GTGCCTACAG TCGAATGAGT
GGTTACACCG TCAAGCCTCC TACCGGAGAC AGCAATGAGC AGACACAATT TATTGATTAT
TTTAATCTGT TCTACAGTAA GCGTGGTCAG GAACAAATAA GCATCTCTCA GCAGCTTGGA
AATTACGGTG CGACATTTTT CAGTGCCAGT CGCCAAAGTT ACTGGAACAC GTCACGCAGC
GACCAGCAAA TATCATTTGG ATTAAATGTG CCGTTTGGTG ATATTACGAC TTCGCTGAAT
TACAGCTATT CCAATAATAT ATGGCAAAAC GATCGGGATC ATTTACTCGC TTTTACGCTT
AATGTTCCCT TCAGTCATTG GATGCGTACA GACAGTCAGT CGGCATTTCG TAATTCAAAC
GCCAGTTACA GTATGTCAAA CGATTTGAAA GGCGGCATGA CCAATCTATC GGGGGTTTAT
GGCACTCTGC TGCCGGATAA TAACCTGAAT TATAGCGTTC AGGTCGGTAA CACCCACGGA
GGTAATACAT CGTCTGGCAC CAGTGGTTAC AGTACTCTTA ATTATCGTGG AGCTTACGGC
AATACTAATG TCGGTTACAG TCGGAGTGGT GACAGCAGCC AGATTTATTA CGGAATGAGT
GGTGGGATTA TTGCTCATGC TGATGGCATC ACCTTTGGAC AGCCGCTGGG CGACACAATG
GTTCTGGTTA AGGCTCCTGG CGCTGATAAT GTCAAAATAG AGAACCAGAC CGGAATTCAT
ACCGACTGGC GTGGCTATGC CATATTACCA TTTGCGACAG AATATAGAGA AAATCGTGTC
GCTCTTAACG CGAATTCCCT TGCAGATAAT GTTGAACTGG ATGAAACCGT GGTCACTGTC
ATCCCAACTC ACGGTGCTAT TGCCAGAGCA ACATTTAATG CACAAATCGG CGGGAAAGTA
TTAATGACGT TGAAGTACGG TAATAAAAGC GTTCCATTCG GTGCAATTGT CACTCACGGA
GAGAATAAAA ATGGCAGCAT TGTCGCGGAA AACGGTCAGG TTTATCTGAC TGGACTTCCA
CAGTCAGGGA AATTACAGGT TTCATGGGGC AATGATAAAA ACTCAAACTG TATTGTCGAT
TACAAGCTTC CTGAAGTCTC TCCTGGAACC TTGCTGAACC AGCAGACAGC AATCTGTCGC
TAA
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| Protein sequence | MVDASTEFDV GQQHLSLSVP QIYVGRMARG YVSPDLWEEG INAGLLNYSF NGNSINNRSN
HNAGKSNYAY LNLQSGINIG SWRLRDNSTW SYNSGSSNSS DSNKWQHINT SAERDIIPLR
SRLTVGDSYT DGDIFDSVNF RGLKINSTEA MLPDSQHGFA PVIHGIARGT AQVSVKQNGY
DVYQTTVPPG PFTIDDINSA ANGGDLQVTI KEADGSIQTL YVPYSSVPVL QRAGYTRYAL
AMGEYRSGNN LQSSPRFIQG SLMHGLEGNW TPYGGMQIAE DYQAFNLGIG KDLGLFGAFS
FDITQANTTL ADGTRHSGQS VKSVYSKSFY QTGTNIQVAG YRYSTQGFYN LSDSAYSRMS
GYTVKPPTGD SNEQTQFIDY FNLFYSKRGQ EQISISQQLG NYGATFFSAS RQSYWNTSRS
DQQISFGLNV PFGDITTSLN YSYSNNIWQN DRDHLLAFTL NVPFSHWMRT DSQSAFRNSN
ASYSMSNDLK GGMTNLSGVY GTLLPDNNLN YSVQVGNTHG GNTSSGTSGY STLNYRGAYG
NTNVGYSRSG DSSQIYYGMS GGIIAHADGI TFGQPLGDTM VLVKAPGADN VKIENQTGIH
TDWRGYAILP FATEYRENRV ALNANSLADN VELDETVVTV IPTHGAIARA TFNAQIGGKV
LMTLKYGNKS VPFGAIVTHG ENKNGSIVAE NGQVYLTGLP QSGKLQVSWG NDKNSNCIVD
YKLPEVSPGT LLNQQTAICR
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